RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 SPOCD1Q6ZMY3 1216 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 USP50Q70EL3 339 aaPredicted RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 VSIG1Q86XK7 387 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 IQCKQ8N0W5 287 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ANKS4BQ8N8V4 417 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ZNF473Q8WTR7 871 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 FAM136AQ96C01 138 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 C12orf42Q96LP6 360 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 DCLK3Q9C098 648 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 VIPAS39Q9H9C1 493 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 TSR3Q9UJK0 312 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 FIS1Q9Y3D6 152 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 TAF1LQ8IZX4 1826 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 GMNCA6NCL1 334 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 HOXC6P09630 235 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 PBX3P40426 434 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 NDUFV1P49821 464 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 GDF10P55107 478 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 MAP3K10Q02779 954 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 MBTD1Q05BQ5 628 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ARHGAP1Q07960 439 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 BMPR2Q13873 1038 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 WSCD1Q658N2 575 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 CCDC125Q86Z20 511 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 PDIK1LQ8N165 341 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 PYROXD2Q8N2H3 581 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 APPL2Q8NEU8 664 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 SLC7A14Q8TBB6 771 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 MAML3Q96JK9 1138 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 NACA2Q9H009 215 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ABHD16BQ9H3Z7 469 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 XPO7Q9UIA9 1087 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 PPP2R3BQ9Y5P8 575 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 HMGCRP04035 888 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 TFE3P19532 575 aaPredicted RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 IL1R2P27930 398 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 SCNN1GP51170 649 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ADIGQ0VDE8 80 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 MYBPC2Q14324 1141 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 SLMAPQ14BN4 828 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 QPCTQ16769 361 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 PMF1Q6P1K2 205 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ZPBP2Q6X784 338 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 MICALCLQ6ZW33 695 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 LRRC34Q8IZ02 419 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 DDX1Q92499 740 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 HVCN1Q96D96 273 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 CELF6Q96J87 481 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 PDZD7Q9H5P4 517 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 TMBIM4Q9HC24 238 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 HOMER3Q9NSC5 361 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 ASNSD1Q9NWL6 643 aa7.87□□□□□ -1.15
PKP4-217ENST00000628904 CPSF3Q9UKF6 684 aaKnown RBP7.87□□□□□ -1.15
PKP4-217ENST00000628904 A0A0G2JND7 137 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 FAM187AA6NFU0 413 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 NT5C1B-RDH14C9J2C7 533 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MAGEB2O15479 319 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 BNIP3LO60238 219 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 CNMDO75829 334 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SNAI1O95863 264 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 CYP1A2P05177 515 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 INHBAP08476 426 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 UNGP13051 313 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 NCAM1P13591 858 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 AMPD1P23109 780 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 EIF4BP23588 611 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 HOXA7P31268 230 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 PEX5P50542 639 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ACTN3Q08043 901 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 TRIM32Q13049 653 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 HIF1AQ16665 826 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 TTC31Q49AM3 519 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 OLFML2BQ68BL8 750 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 NOTUMQ6P988 496 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 KCNV1Q6PIU1 500 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ZNF662Q6ZS27 426 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 FAM183BPQ6ZVS7 135 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SPOCK2Q92563 424 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 FAM81BQ96LP2 452 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ZMAT2Q96NC0 199 aaKnown RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 STRA6Q9BX79 667 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ATXN3LQ9H3M9 355 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 IFT122Q9HBG6 1241 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 STXBP5LQ9Y2K9 1186 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 M0QYT0 321 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 RIPK2O43353 540 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 C22orf31O95567 290 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 OR4Q2P0C623 313 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ARL1P40616 181 aaPredicted RBP7.86□□□□□ -1.15
PKP4-217ENST00000628904 MSH2P43246 934 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SULT1E1P49888 294 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MFSD10Q14728 455 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 SURF1Q15526 300 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 TFDP3Q5H9I0 405 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 DUPD1Q68J44 220 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ARHGEF18Q6ZSZ5 1173 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 ILDR2Q71H61 639 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 MAP7D3Q8IWC1 876 aa7.86□□□□□ -1.15
PKP4-217ENST00000628904 UNC45BQ8IWX7 931 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms