RNA–Protein interactions for RNA: ENST00000628734.1

UBE2A-208, Transcript of ubiquitin conjugating enzyme E2 A, human

TSL 2

Gene UBE2A, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE2A-208	ENST00000628734	CLIC5	Q9NZA1	410 aa		4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	FRMD4A	Q9P2Q2	1039 aa	Predicted RBP	4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	SAP30BP	Q9UHR5	308 aa	Known RBP	4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	BLOC1S6	Q9UL45	172 aa		4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	CDYL	Q9Y232	598 aa		4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	CFAP65	Q6ZU64	1925 aa	Known RBP	4.25	□□□□□ -1.73
UBE2A-208	ENST00000628734	CCDC195	A0A1B0GUA6	201 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	PRSS47	A8MTI9	375 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	ADM5	C9JUS6	153 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734		E7ENX8	843 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	NDUFS2	O75306	463 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	GPD1	P21695	349 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	CNGA1	P29973	690 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	HOXC13	P31276	330 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TSPAN7	P41732	249 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TRAPPC10	P48553	1259 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	RBM6	P78332	1123 aa	Known RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TAP2	Q03519	686 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TRAF1	Q13077	416 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	HLX	Q14774	488 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	RAB39A	Q14964	217 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	PPP2R5B	Q15173	497 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TAF11	Q15544	211 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	AKNAD1	Q5T1N1	836 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	C10orf62	Q5T681	223 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	SYNE3	Q6ZMZ3	975 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	NECAB2	Q7Z6G3	386 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	RAVER1	Q8IY67	606 aa	Known RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TRIML1	Q8N9V2	468 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	SLC30A5	Q8TAD4	765 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	HASPIN	Q8TF76	798 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	ZFPM2	Q8WW38	1151 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TFAP2B	Q92481	460 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	JADE3	Q92613	823 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	RAB24	Q969Q5	203 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	HDAC10	Q969S8	669 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	TBC1D20	Q96BZ9	403 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	FBXL20	Q96IG2	436 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	C8orf48	Q96LL4	319 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	PUS7L	Q9H0K6	701 aa	Known RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	IPP	Q9Y573	584 aa		4.24	□□□□□ -1.73
UBE2A-208	ENST00000628734	KAT6B	Q8WYB5	2073 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734		A0A1W2PRQ8	180 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734		F8VZ95	297 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	TBX3	O15119	743 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	NPHP1	O15259	732 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	RPN1	P04843	607 aa	Known RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CD1A	P06126	327 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	PPP3CB	P16298	524 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	SMARCA1	P28370	1054 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	GNAL	P38405	381 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	SLC16A1	P53985	500 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	SH3BGR	P55822	239 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	KRT85	P78386	507 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	IRX1	P78414	480 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	MC2R	Q01718	297 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	TLE1	Q04724	770 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	FPGS	Q05932	587 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	EIF2B5	Q13144	721 aa	Known RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	PRPF4B	Q13523	1007 aa	Known RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CD300E	Q496F6	205 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	FILIP1L	Q4L180	1135 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	KLHL22	Q53GT1	634 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	ODR4	Q5SWX8	454 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CCDC91	Q7Z6B0	441 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	RSPH3	Q86UC2	560 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	MYOCD	Q8IZQ8	938 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CFAP52	Q8N1V2	620 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CNTD1	Q8N815	330 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	PPM1N	Q8N819	430 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	C1orf162	Q8NEQ5	155 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	APPL2	Q8NEU8	664 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	TMIE	Q8NEW7	156 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	SNX19	Q92543	992 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	DPF1	Q92782	380 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	TSR2	Q969E8	191 aa	Known RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	LRIG1	Q96JA1	1093 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	PACSIN1	Q9BY11	444 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	NACA2	Q9H009	215 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	UNC45A	Q9H3U1	944 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	RPAP3	Q9H6T3	665 aa	Predicted RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CPNE5	Q9HCH3	593 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CWC15	Q9P013	229 aa	Known RBP	4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	CALCOCO1	Q9P1Z2	691 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	TBK1	Q9UHD2	729 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	PCDHA13	Q9Y5I0	950 aa		4.23	□□□□□ -1.73
UBE2A-208	ENST00000628734	WDR91	A4D1P6	747 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	VWC2L	B2RUY7	222 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	C19orf81	C9J6K1	198 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	DYNC1I1	O14576	645 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	KCNAB3	O43448	404 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	HTRA2	O43464	458 aa	Predicted RBP	4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	KRT38	O76015	456 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	ANXA1	P04083	346 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	PDGFRB	P09619	1106 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	C5AR1	P21730	350 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	EDNRB	P24530	442 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	KRTAP5-9	P26371	169 aa		4.22	□□□□□ -1.73
UBE2A-208	ENST00000628734	IARS	P41252	1262 aa	Known RBP	4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms