RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 SPATA2LQ8IUW3 424 aaPredicted RBP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 DCP1BQ8IZD4 617 aaKnown RBP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 C1orf131Q8NDD1 294 aaKnown RBP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 ZMIZ2Q8NF64 920 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 SLC30A5Q8TAD4 765 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 SECISBP2LQ93073 1101 aaKnown RBP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 SMOQ99835 787 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 TJP2Q9UDY2 1190 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 STK39Q9UEW8 545 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 KIAA1257Q9ULG3 409 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 PCDHGC3Q9UN70 934 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 DOCK6Q96HP0 2047 aa17.59■□□□□ 0.41
CCNA1-203ENST00000625767 ZNF638Q14966 1978 aaKnown RBP17.59■□□□□ 0.41
CCNA1-203ENST00000625767 PIK3R2O00459 728 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 TGM5O43548 720 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 AP1G2O75843 785 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 ABLIM3O94929 683 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 TNFAIP3P21580 790 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 GTF2F1P35269 517 aaKnown RBP eCLIP17.58■□□□□ 0.41
CCNA1-203ENST00000625767 MAP3K7CLP57077 242 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 CDK17Q00537 523 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 PDE4CQ08493 712 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 MAPK8IP2Q13387 824 aaPredicted RBP17.58■□□□□ 0.41
CCNA1-203ENST00000625767 RAB33AQ14088 237 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 CYP26C1Q6V0L0 522 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 CLEC20AQ6ZU45 233 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 CPA5Q8WXQ8 436 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 PDCL3Q9H2J4 239 aa17.58■□□□□ 0.41
CCNA1-203ENST00000625767 NGRNQ9NPE2 291 aaKnown RBP17.58■□□□□ 0.41
CCNA1-203ENST00000625767 MED7O43513 233 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 GABBR2O75899 941 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 KLRC2P26717 231 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 GPD2P43304 727 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 RGS7P49802 495 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 KIF11P52732 1056 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 NOMO3P69849 1222 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 NAA35Q5VZE5 725 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 ZNF677Q86XU0 584 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 FMNL3Q8IVF7 1028 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 GPR65Q8IYL9 337 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 ANKRD52Q8NB46 1076 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 ZNF461Q8TAF7 563 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 FEZF2Q8TBJ5 459 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 GPR152Q8TDT2 470 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 DEF6Q9H4E7 631 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.4
CCNA1-203ENST00000625767 BZW2Q9Y6E2 419 aaKnown RBP17.58■□□□□ 0.4
CCNA1-203ENST00000625767 UNC80Q8N2C7 3258 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 SSU72P8A0A1W2PR75 194 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 CYP1A1P04798 512 aaPredicted RBP17.57■□□□□ 0.4
CCNA1-203ENST00000625767 NPR3P17342 541 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 MAPRE1Q15691 268 aaKnown RBP17.57■□□□□ 0.4
CCNA1-203ENST00000625767 NFE2Q16621 373 aaPredicted RBP17.57■□□□□ 0.4
CCNA1-203ENST00000625767 DDR2Q16832 855 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 CLEC16AQ2KHT3 1053 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 CFAP221Q4G0U5 840 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 PMF1Q6P1K2 205 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 LLGL2Q6P1M3 1020 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 C4orf50Q6ZRC1 276 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 GPRIN1Q7Z2K8 1008 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 SMARCD1Q96GM5 515 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 CCDC42Q96M95 316 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 DUSP16Q9BY84 665 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 OXCT2Q9BYC2 517 aaPredicted RBP17.57■□□□□ 0.4
CCNA1-203ENST00000625767 NENFQ9UMX5 172 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 SSX2IPQ9Y2D8 614 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 MYO16Q9Y6X6 1858 aa17.57■□□□□ 0.4
CCNA1-203ENST00000625767 F8VP50 259 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 CLASP2O75122 1294 aaKnown RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 FAM200BP0CF97 657 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 UNGP13051 313 aaPredicted RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 ATF2P15336 505 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 EPCAMP16422 314 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 CLCN4P51793 760 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 ADGRE1Q14246 886 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 BMS1Q14692 1282 aaKnown RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 LILRA6Q6PI73 481 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 TOGARAM2Q6ZUX3 1019 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 TMTC1Q8IUR5 882 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 SCN4BQ8IWT1 228 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 ACRBPQ8NEB7 543 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 SLC35F5Q8WV83 523 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 MRPL38Q96DV4 380 aaKnown RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 SEPT5Q99719 369 aaPredicted RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 DESI2Q9BSY9 194 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 EMILIN2Q9BXX0 1053 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 PACSIN1Q9BY11 444 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 CYP4F11Q9HBI6 524 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 HESX1Q9UBX0 185 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 AFF4Q9UHB7 1163 aaKnown RBP17.56■□□□□ 0.4
CCNA1-203ENST00000625767 TFR2Q9UP52 801 aa17.56■□□□□ 0.4
CCNA1-203ENST00000625767 A0A0U1RQJ8 604 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 HHLA1C9JL84 531 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 AKR1B10O60218 316 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 ADH1AP07327 375 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 ATF6P18850 670 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 BCAT1P54687 386 aa17.55■□□□□ 0.4
CCNA1-203ENST00000625767 BST2Q10589 180 aaKnown RBP17.55■□□□□ 0.4
CCNA1-203ENST00000625767 STILQ15468 1287 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms