RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 PPCSQ9HAB8 311 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 KRT19P08727 400 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 KRT7P08729 469 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ADRA1DP25100 572 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ALDH3A1P30838 453 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 POLR2BP30876 1174 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 NRLP54845 237 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 YWHAEP62258 255 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 TAF5Q15542 800 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 HADHQ16836 314 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 BBS9Q3SYG4 887 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 FAM160B1Q5W0V3 765 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ZNF449Q6P9G9 518 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 CEP120Q8N960 986 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 RAB3IPQ96QF0 476 aaPredicted RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 METTL5Q9NRN9 209 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 ABLIM1O14639 778 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 DCTN3O75935 186 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 TMEM63AO94886 807 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 CDH8P55286 799 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 MAPK6Q16659 721 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 FAM182AQ5T1J6 154 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ADGRD1Q6QNK2 874 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 PALM2Q8IXS6 379 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 CPXM1Q96SM3 734 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 LRMDAQ9H2I8 198 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 DOCK1Q14185 1865 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 TNS1Q9HBL0 1735 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 NFKBIEO00221 500 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ATP5HO75947 161 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ZWINTO95229 277 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 CBX6O95503 412 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 SEPT7Q16181 437 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 LY6KQ17RY6 165 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ANGEL2Q5VTE6 544 aaKnown RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 TRIM50Q86XT4 487 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 RFX6Q8HWS3 928 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 FAM71DQ8N9W8 422 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 TTC13Q8NBP0 860 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 KCTD6Q8NC69 237 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 HSPH1Q92598 858 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 NPHS2Q9NP85 383 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 ZMYND8Q9ULU4 1186 aaPredicted RBP11.81□□□□□ -0.52
VARS2-213ENST00000625423 EFR3BQ9Y2G0 817 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 SIP14410 1827 aa11.81□□□□□ -0.52
VARS2-213ENST00000625423 TNNC2P02585 160 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 GJB1P08034 283 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 T-ENOLP0DO92 83 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 BASP1P80723 227 aaKnown RBP11.8□□□□□ -0.52
VARS2-213ENST00000625423 IER5Q5VY09 327 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 ZBTB8OSQ8IWT0 167 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 CHST13Q8NET6 341 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 TCP10LQ8TDR4 215 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 SEPT1Q8WYJ6 367 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 ACSS3Q9H6R3 686 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 XPO7Q9UIA9 1087 aaKnown RBP11.8□□□□□ -0.52
VARS2-213ENST00000625423 ERBB2P04626 1255 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 EIF3EP60228 445 aaKnown RBP11.8□□□□□ -0.52
VARS2-213ENST00000625423 SURF1Q15526 300 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 SYCP2LQ5T4T6 812 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 CDCA2Q69YH5 1023 aaPredicted RBP11.8□□□□□ -0.52
VARS2-213ENST00000625423 XYLT1Q86Y38 959 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 MZB1Q8WU39 189 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 KLRG1Q96E93 195 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 ANKRD36BP1Q96IX9 119 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 LHX5Q9H2C1 402 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 ALG13Q9NP73 1137 aaKnown RBP11.8□□□□□ -0.52
VARS2-213ENST00000625423 CYLDQ9NQC7 956 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 SLC17A7Q9P2U7 560 aa11.8□□□□□ -0.52
VARS2-213ENST00000625423 B4GALT5O43286 388 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 RNASELQ05823 741 aaKnown RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 OVGP1Q12889 678 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TMEM132AQ24JP5 1023 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 PARP6Q2NL67 630 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 KLHL38Q2WGJ6 581 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TAF1BQ53T94 588 aaPredicted RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 PLEKHG4Q58EX7 1191 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 CCDC125Q86Z20 511 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TMEM192Q8IY95 271 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 PDIK1LQ8N165 341 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 DCAKDQ8WVC6 231 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 SLC7A6OSQ96CW6 309 aaPredicted RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 DHRS4Q9BTZ2 278 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 CALN1Q9BXU9 219 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 SSU72Q9NP77 194 aaKnown RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 CHMP2BQ9UQN3 213 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 SOWAHBA6NEL2 793 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 E7ESA3 106 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 MED7O43513 233 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 ATP2A2P16615 1042 aaKnown RBP11.79□□□□□ -0.52
VARS2-213ENST00000625423 MIPP30301 263 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 RAD23BP54727 409 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 NAA25Q14CX7 972 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 TAZQ16635 292 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 EEF1DP3Q658K8 133 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 MPZL3Q6UWV2 235 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 NLRP9Q7RTR0 991 aa11.79□□□□□ -0.52
VARS2-213ENST00000625423 AGGF1Q8N302 714 aaeCLIP11.79□□□□□ -0.52
VARS2-213ENST00000625423 FNIP1Q8TF40 1166 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms