RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 TEAD2Q15562 447 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 TAF12Q16514 161 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 SOWAHAQ2M3V2 549 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 ARHGAP15Q53QZ3 475 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 LMBRD2Q68DH5 695 aaPredicted RBP13.5□□□□□ -0.25
PNKP-217ENST00000625216 MFSD6LQ8IWD5 586 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 DRC7Q8IY82 874 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 TTC9BQ8N6N2 239 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 IRF7Q92985 503 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 SLC35C1Q96A29 364 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 ZSWIM3Q96MP5 696 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 ATXN3LQ9H3M9 355 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 NDST4Q9H3R1 872 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 SLITRK6Q9H5Y7 841 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 BRD9Q9H8M2 597 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 ABI2Q9NYB9 513 aaPredicted RBP13.5□□□□□ -0.25
PNKP-217ENST00000625216 FRMD4BQ9Y2L6 1034 aa13.5□□□□□ -0.25
PNKP-217ENST00000625216 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.5□□□□□ -0.25
PNKP-217ENST00000625216 DOCK6Q96HP0 2047 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 NOTCH4Q99466 2003 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 PTPRJQ12913 1337 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 SOBPA7XYQ1 873 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 MAPK13O15264 365 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 SOAT2O75908 522 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 STAU1O95793 577 aaKnown RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 TRIM49P0CI25 452 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 TRIM49CP0CI26 452 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 DLATP10515 647 aaKnown RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 GJA1P17302 382 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 ATF6P18850 670 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 GABRR2P28476 465 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 MAGEA9P43362 315 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 RPL10AP62906 217 aaKnown RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 TBX2Q13207 712 aaPredicted RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 DCAF17Q5H9S7 520 aaPredicted RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 INTS6LQ5JSJ4 861 aaKnown RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 GAREM2Q75VX8 874 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 ADGRF2Q8IZF7 708 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 PJA1Q8NG27 643 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 CCDC127Q96BQ5 260 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 FUBP3Q96I24 572 aaKnown RBP eCLIP13.49□□□□□ -0.25
PNKP-217ENST00000625216 GCNAQ96QF7 691 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 ERGIC2Q96RQ1 377 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 CGRRF1Q99675 332 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 OBP2AQ9NY56 170 aa13.49□□□□□ -0.25
PNKP-217ENST00000625216 MRPS17Q9Y2R5 130 aaKnown RBP13.49□□□□□ -0.25
PNKP-217ENST00000625216 A0A1W2PQC6 194 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 PROB1E7EW31 1015 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 MAN2B1O00754 1011 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 NRG2O14511 850 aaPredicted RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 ZNF263O14978 683 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 NCAM2O15394 837 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 CST3P01034 146 aaPredicted RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 PTMAP06454 111 aaKnown RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 CSH1P0DML2 217 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 CSH2P0DML3 217 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 GLULP15104 373 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 WARSP23381 471 aaKnown RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 ATICP31939 592 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 VIPR2P41587 438 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 KLK7P49862 253 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 MLLT6P55198 1093 aaPredicted RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 GOLGA8FQ08AF8 430 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 GOLGA8DPQ0D2H9 430 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 KCNH2Q12809 1159 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 ARID5BQ14865 1188 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 SYCP1Q15431 976 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 MAPRE1Q15691 268 aaKnown RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 CFAP221Q4G0U5 840 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 C1orf220Q5T0J3 134 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 TCERG1LQ5VWI1 586 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 SPECC1LQ69YQ0 1117 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 SCARA3Q6AZY7 606 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 FAM171BQ6P995 826 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 VITQ6UXI7 678 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 ZNF852Q6ZMS4 543 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 CCDC186Q7Z3E2 898 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 FAM84AQ96KN4 292 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 PKMYT1Q99640 499 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 LPIN3Q9BQK8 851 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 TASP1Q9H6P5 420 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 ZNF334Q9HCZ1 680 aaPredicted RBP13.48□□□□□ -0.25
PNKP-217ENST00000625216 TMLHEQ9NVH6 421 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 DLGAP2Q9P1A6 1054 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 IMPACTQ9P2X3 320 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 GTF3C4Q9UKN8 822 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 CDH9Q9ULB4 789 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 SIK3Q9Y2K2 1263 aa13.48□□□□□ -0.25
PNKP-217ENST00000625216 SCN1AP35498 2009 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 KMT2EQ8IZD2 1858 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 FAM170BA6NMN3 283 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 HEPACAM2A8MVW5 462 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 DPYSL4O14531 572 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 TACC1O75410 805 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 AFPP02771 609 aaKnown RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 DCNP07585 359 aaKnown RBP13.47□□□□□ -0.25
PNKP-217ENST00000625216 DDX6P26196 483 aaKnown RBP eCLIP13.47□□□□□ -0.25
PNKP-217ENST00000625216 GDI1P31150 447 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 NBL1P41271 181 aa13.47□□□□□ -0.25
PNKP-217ENST00000625216 MAGEA11P43364 429 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms