RNA–Protein interactions for RNA: ENST00000625171.3

LINC00963-220, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 830 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-220ENST00000625171 DNAJB4Q9UDY4 337 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 MRFAP1Q9Y605 127 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 ALG6Q9Y672 507 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 MICAL3Q7RTP6 2002 aa12.43□□□□□ -0.42
LINC00963-220ENST00000625171 SCN5AQ14524 2016 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 PRUNE2Q8WUY3 3088 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 M0QYV0 167 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 MYO1FO00160 1098 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 TBC1D4O60343 1298 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 TADA2AO75478 443 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 ITGB1P05556 798 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 FOSL2P15408 326 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 BRCC3P46736 316 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 OR1G1P47890 313 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 SLC11A1P49279 550 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 SLC8A3P57103 927 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 HTRA4P83105 476 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 YWHAHQ04917 246 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 WHAMMP3Q1A5X7 153 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 INTS6LQ5JSJ4 861 aaKnown RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 KIAA0319Q5VV43 1072 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 MMS22LQ6ZRQ5 1243 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 C16orf59Q7L2K0 433 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 ZNF572Q7Z3I7 529 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 DAAM2Q86T65 1068 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 XYLT1Q86Y38 959 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 DNAAF5Q86Y56 855 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 PASD1Q8IV76 773 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 PHOSPHO2Q8TCD6 241 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 IPO4Q8TEX9 1081 aaKnown RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 CD101Q93033 1021 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 FUBP3Q96I24 572 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 PBKQ96KB5 322 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 RPGRIP1Q96KN7 1286 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 CPXM1Q96SM3 734 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 C11orf70Q9BRQ4 267 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 TTYH1Q9H313 450 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 DPEP3Q9H4B8 488 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 CWH43Q9H720 699 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 AMFRQ9UKV5 643 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 TTC7AQ9ULT0 858 aaPredicted RBP12.42□□□□□ -0.42
LINC00963-220ENST00000625171 HYOU1Q9Y4L1 999 aa12.42□□□□□ -0.42
LINC00963-220ENST00000625171 SF3B1O75533 1304 aaKnown RBP eCLIP12.41□□□□□ -0.428e-6■■■■■ 107
LINC00963-220ENST00000625171 OR6C75A6NL08 312 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 TBKBP1A7MCY6 615 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 URI1O94763 535 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PROSCO94903 275 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 FGBP02675 491 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 ATP1A1P05023 1023 aaKnown RBP12.41□□□□□ -0.42
LINC00963-220ENST00000625171 NPR3P17342 541 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 GTF2F1P35269 517 aaKnown RBP eCLIP12.41□□□□□ -0.421e-6■■■■■ 32
LINC00963-220ENST00000625171 ALDH7A1P49419 539 aaKnown RBP12.41□□□□□ -0.42
LINC00963-220ENST00000625171 FPGSQ05932 587 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PDE4CQ08493 712 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PIGHQ14442 188 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-220ENST00000625171 CLUL1Q15846 466 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 GOLGA7BQ2TAP0 167 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 CFAP221Q4G0U5 840 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 RAB41Q5JT25 222 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 C9orf50Q5SZB4 431 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 LRRC38Q5VT99 294 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PMF1Q6P1K2 205 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PSRC1Q6PGN9 363 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-220ENST00000625171 PEX26Q7Z412 305 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 SLC2A14Q8TDB8 520 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 MYLIPQ8WY64 445 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 CEP295NLQ96MC4 621 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 NCAPGQ9BPX3 1015 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 ZCWPW1Q9H0M4 648 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 TMEM51Q9NW97 253 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 ASNSD1Q9NWL6 643 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 MARCH5Q9NX47 278 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 CACNG4Q9UBN1 327 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 IP6K2Q9UHH9 426 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 TMEM59LQ9UK28 342 aa12.41□□□□□ -0.42
LINC00963-220ENST00000625171 FNDC1Q4ZHG4 1894 aaPredicted RBP12.4□□□□□ -0.42
LINC00963-220ENST00000625171 MYH10P35580 1976 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 CCDC66A2RUB6 948 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 MYBPHLA2RUH7 354 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 H7C4K7 107 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 GLI1P08151 1106 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 KRT3P12035 628 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 CTNNA2P26232 953 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 PEX5P50542 639 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 BCAR1P56945 870 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 TSPY1Q01534 308 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 ORC1Q13415 861 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 RPS6KA1Q15418 735 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
LINC00963-220ENST00000625171 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 FUT10Q6P4F1 479 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 C4orf50Q6ZRC1 276 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 ANKS3Q6ZW76 656 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
LINC00963-220ENST00000625171 CEP112Q8N8E3 955 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 UBA3Q8TBC4 463 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 C2orf15Q8WU43 125 aaKnown RBP12.4□□□□□ -0.42
LINC00963-220ENST00000625171 HERVK_113Q902F9 699 aa12.4□□□□□ -0.42
LINC00963-220ENST00000625171 BADQ92934 168 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms