RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 RPA3P35244 121 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 PCK1P35558 622 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 MSH2P43246 934 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 BAG6P46379 1132 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 CTCFP49711 727 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC26A2P50443 739 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 TNFAIP2Q03169 654 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 PTPN11Q06124 597 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 LY6KQ17RY6 165 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 MSS51Q4VC12 460 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 FNBP1LQ5T0N5 605 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 TREML2Q5T2D2 321 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 SCARA5Q6ZMJ2 495 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 FAM47EQ6ZV65 393 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 PNMA8AQ86V59 439 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 CEP57Q86XR8 500 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 IFNLR1Q8IU57 520 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 UNC45BQ8IWX7 931 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 KIAA0319LQ8IZA0 1049 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 AGGF1Q8N302 714 aaeCLIP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 CXorf38Q8TB03 319 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 TRPM4Q8TD43 1214 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 LRRC8CQ8TDW0 803 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 PYROXD1Q8WU10 500 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 DCAKDQ8WVC6 231 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 RSAD2Q8WXG1 361 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF75CPQ92670 426 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 INPP5DQ92835 1189 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 ACSF2Q96CM8 615 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 HAUS1Q96CS2 278 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 FGD4Q96M96 766 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 RAB3IPQ96QF0 476 aaPredicted RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 CPXM1Q96SM3 734 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 MPHOSPH6Q99547 160 aaKnown RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 WDR83Q9BRX9 315 aaKnown RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 ELOVL4Q9GZR5 314 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 MYLK2Q9H1R3 596 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 LRMDAQ9H2I8 198 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZWILCHQ9H900 591 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 RPF1Q9H9Y2 349 aaKnown RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 RSAD1Q9HA92 442 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 METTL5Q9NRN9 209 aaKnown RBP10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 ASNSD1Q9NWL6 643 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 GRID1Q9ULK0 1009 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 CHKBQ9Y259 395 aa10.08□□□□□ -0.8
IGHV3-54-201ENST00000622166 OTOFQ9HC10 1997 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 LOC102724159A0A0B4J2E5 919 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 TM9SF1O15321 606 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 HBP1O60381 514 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 CILPO75339 1184 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 MICAL2O94851 1124 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 ARIH2O95376 493 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 STAU1O95793 577 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC25A27O95847 323 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 IFNB1P01574 187 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 HMGCRP04035 888 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 MCF2P10911 925 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 MIPP30301 263 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 STIP1P31948 543 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 GDF10P55107 478 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 EIF3EP60228 445 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 GAD2Q05329 585 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 RNASELQ05823 741 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 MBTD1Q05BQ5 628 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 PDE4CQ08493 712 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 ADCY1Q08828 1119 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 DNAJC3Q13217 504 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 TFDP2Q14188 446 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 DPYSL3Q14195 570 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 NOMO1Q15155 1222 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 PWP2Q15269 919 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 KYAT1Q16773 422 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 SLC45A4Q5BKX6 768 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 WDR78Q5VTH9 848 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 LVRNQ6Q4G3 990 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 RFX6Q8HWS3 928 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 ANKMY2Q8IV38 441 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 C4orf33Q8N1A6 199 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 LRRC71Q8N4P6 559 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 ZNF276Q8N554 614 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 TTC39CQ8N584 583 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 C1orf127Q8N9H9 656 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 BANPQ8N9N5 519 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 GIMAP7Q8NHV1 300 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 AGAP11Q8TF27 550 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 USP6NLQ92738 828 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 TMEM176AQ96HP8 235 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 PAIP2Q9BPZ3 127 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 FRMD8Q9BZ67 464 aaPredicted RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 VPS11Q9H270 941 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 SMARCAD1Q9H4L7 1026 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 KIF9Q9HAQ2 790 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 PNPLA8Q9NP80 782 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 PRMT7Q9NVM4 692 aaPredicted RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 GGA3Q9NZ52 723 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 GPRC5DQ9NZD1 345 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 NXF1Q9UBU9 619 aaKnown RBP10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 TJP2Q9UDY2 1190 aa10.07□□□□□ -0.8
IGHV3-54-201ENST00000622166 KIAA1257Q9ULG3 409 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms