RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 NR2E1Q9Y466 385 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 NRXN2Q9P2S2 1712 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 MYO3BQ8WXR4 1341 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 GOLGA8CPA6NN73 597 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 H3BNX3 289 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 EML1O00423 815 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 MCF2LO15068 1137 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 BAG2O95816 211 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 FUCA1P04066 466 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 PRKCIP41743 596 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 ENTPD1P49961 510 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 HNRNPFP52597 415 aaKnown RBP7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 VCPP55072 806 aaKnown RBP7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 NOP14P78316 857 aaKnown RBP7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 DLG1Q12959 904 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 PHKG1Q16816 387 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 KCTD21Q4G0X4 260 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 PPP4R3CPQ6ZMV5 832 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 MIER3Q7Z3K6 550 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 SIAH1Q8IUQ4 282 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 KSR1Q8IVT5 923 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 LSMEM2Q8N112 164 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 CENPSQ8N2Z9 138 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 ESX1Q8N693 406 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 ICA1LQ8NDH6 482 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 CCDC127Q96BQ5 260 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 MED30Q96HR3 178 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 PANX3Q96QZ0 392 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 TTC1Q99614 292 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 HAUS8Q9BT25 410 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 CEP44Q9C0F1 390 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 IRF2BPLQ9H1B7 796 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 S100A14Q9HCY8 104 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 GCNT4Q9P109 453 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 IGSF9Q9P2J2 1179 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 SEL1LQ9UBV2 794 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 VAV3Q9UKW4 847 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 RAB26Q9ULW5 256 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 DOLKQ9UPQ8 538 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 PCDHA3Q9Y5H8 950 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 SQORQ9Y6N5 450 aa7.84□□□□□ -1.15
TRIM49B-202ENST00000622138 SMCHD1A6NHR9 2005 aa7.84□□□□□ -1.16
TRIM49B-202ENST00000622138 NCANO14594 1321 aa7.84□□□□□ -1.16
TRIM49B-202ENST00000622138 CFAP69A5D8W1 941 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TRIM64CA6NLI5 447 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 SFI1A8K8P3 1242 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TEX28O15482 410 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 AQP9O43315 295 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ITM2AO43736 263 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CLASP2O75122 1294 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 USP1O94782 785 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 FBXO21O94952 628 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 UBL4AP11441 157 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 EEF2P13639 858 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 COPB2P35606 906 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 GPC3P51654 580 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CTAG1AP78358 180 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CDK16Q00536 496 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 LRP8Q14114 963 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 COG2Q14746 738 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 FXNQ16595 210 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 DOK7Q18PE1 504 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ZNF829Q3KNS6 432 aaPredicted RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 DCAF12L1Q5VU92 463 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 PPP2R2DQ66LE6 453 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 APOBEC3HQ6NTF7 200 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 FBXL19Q6PCT2 694 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TTC23LQ6PF05 361 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ELMSAN1Q6PJG2 1045 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 DCLRE1AQ6PJP8 1040 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ANO5Q75V66 913 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 VASH1Q7L8A9 365 aaPredicted RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 OTOAQ7RTW8 1153 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TMC7Q7Z402 723 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 C14orf80Q86SX3 495 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 SRRM1Q8IYB3 904 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 DENND1AQ8TEH3 1009 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CYTH2Q99418 400 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 OSGEPQ9NPF4 335 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 SLC38A7Q9NVC3 462 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 RABGEF1Q9UJ41 708 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ERVK-11Q9UQG0 969 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CLEC11AQ9Y240 323 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 PSME4Q14997 1843 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 LTBP4Q8N2S1 1624 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 RBBP6Q7Z6E9 1792 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 A0A1W2PRG0 241 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 NOTOA8MTQ0 251 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 UBAP1LF5GYI3 381 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 K7EPI3 171 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 ZNF701M0R085 212 aaPredicted RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TXNDC9O14530 226 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 MSH4O15457 936 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 DDX3YO15523 660 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 TGFB1I1O43294 461 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 XPOTO43592 962 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 CHRNB1P11230 501 aa7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 XRCC5P13010 732 aaKnown RBP7.83□□□□□ -1.16
TRIM49B-202ENST00000622138 KRT13P13646 458 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms