RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 CEP57Q86XR8 500 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 HERC6Q8IVU3 1022 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 RNF168Q8IYW5 571 aaPredicted RBP11.26□□□□□ -0.61
CPNE3-212ENST00000621783 LRRC57Q8N9N7 239 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 KIF18AQ8NI77 898 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SLC35F5Q8WV83 523 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SMARCD1Q96GM5 515 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 NAPGQ99747 312 aaPredicted RBP11.26□□□□□ -0.61
CPNE3-212ENST00000621783 HERC2P3Q9BVR0 1158 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 VN1R3Q9BXE9 311 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SLC4A5Q9BY07 1137 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 DUSP16Q9BY84 665 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 ZCWPW1Q9H0M4 648 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 GOLPH3Q9H4A6 298 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SYNCQ9H7C4 482 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 ST7Q9NRC1 585 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 TMLHEQ9NVH6 421 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 STRIP2Q9ULQ0 834 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SLC4A7Q9Y6M7 1214 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 SCINQ9Y6U3 715 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 PATJQ8NI35 1801 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 CTAGE9A4FU28 777 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 CARNS1A5YM72 827 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 E5RJQ4 531 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 GOLGA8SH3BPF8 625 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 PIK3R2O00459 728 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 BUB1BO60566 1050 aaPredicted RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 AP1G2O75843 785 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 FTCDO95954 541 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 OR4Q2P0C623 313 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 ATP2A2P16615 1042 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 PLA2G4AP47712 749 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 GABRB2P47870 512 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 CDR1P51861 262 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 MAMLD1Q13495 774 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 MRPL58Q14197 206 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 MAPRE1Q15691 268 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 C11orf63Q6NUN7 778 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 PMF1Q6P1K2 205 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 CLEC20AQ6ZU45 233 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 TAS1R1Q7RTX1 841 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 LRRTM3Q86VH5 581 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 XYLT1Q86Y38 959 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 C3orf20Q8ND61 904 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 SP7Q8TDD2 431 aaPredicted RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 STK32AQ8WU08 396 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 C18orf8Q96DM3 657 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 BTBD6Q96KE9 485 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 CALR3Q96L12 384 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 ZBED2Q9BTP6 218 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 TTPALQ9BTX7 342 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 RHOBTB2Q9BYZ6 727 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 MTIF3Q9H2K0 278 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 MRPL47Q9HD33 250 aaKnown RBP11.25□□□□□ -0.61
CPNE3-212ENST00000621783 PARVAQ9NVD7 372 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 WDR35Q9P2L0 1181 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 ANAPC7Q9UJX3 599 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 PTPRDP23468 1912 aa11.25□□□□□ -0.61
CPNE3-212ENST00000621783 OR6C75A6NL08 312 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 TMEM110-MUSTN1A8MSY1 372 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 H7C4K7 107 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 ENC1O14682 589 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 NCK2O43639 380 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 GABBR2O75899 941 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 BEST1O76090 585 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 ATP1A1P05023 1023 aaKnown RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 LINC00271P0C7V0 271 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 RPL34P49207 117 aaKnown RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 CACNA2D1P54289 1103 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 MAP3K7CLP57077 242 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SLC8A3P57103 927 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 USP41Q3LFD5 358 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 PPP1R15BQ5SWA1 713 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 RASIP1Q5U651 963 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 PRSS55Q6UWB4 352 aaPredicted RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 C4orf50Q6ZRC1 276 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 FAM183BPQ6ZVS7 135 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 ANKS3Q6ZW76 656 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SLFN11Q7Z7L1 901 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 DAAM2Q86T65 1068 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 PIGZQ86VD9 579 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SPATA2LQ8IUW3 424 aaPredicted RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 DCP1BQ8IZD4 617 aaKnown RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SYCE1Q8N0S2 351 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 FIBCD1Q8N539 461 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 ZMIZ2Q8NF64 920 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 FEZF2Q8TBJ5 459 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 MCRS1Q96EZ8 462 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 TMEM169Q96HH4 297 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 MCEEQ96PE7 176 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SMOQ99835 787 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SELENOOQ9BVL4 669 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 TRIM7Q9C029 511 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 MIS12Q9H081 205 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 AAASQ9NRG9 546 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 METTL5Q9NRN9 209 aaKnown RBP11.24□□□□□ -0.61
CPNE3-212ENST00000621783 TMEM30AQ9NV96 361 aa11.24□□□□□ -0.61
CPNE3-212ENST00000621783 SPG21Q9NZD8 308 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms