RNA–Protein interactions for RNA: ENST00000621715.4

TARDBP-225, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-225ENST00000621715 PDE11AQ9HCR9 933 aa17.97■□□□□ 0.47
TARDBP-225ENST00000621715 VPS45Q9NRW7 570 aa17.97■□□□□ 0.47
TARDBP-225ENST00000621715 RBAKQ9NYW8 714 aaPredicted RBP17.97■□□□□ 0.47
TARDBP-225ENST00000621715 EBF1Q9UH73 591 aa17.97■□□□□ 0.47
TARDBP-225ENST00000621715 FBXO2Q9UK22 296 aaPredicted RBP17.97■□□□□ 0.47
TARDBP-225ENST00000621715 SNX9Q9Y5X1 595 aa17.97■□□□□ 0.47
TARDBP-225ENST00000621715 ZFYVE26Q68DK2 2539 aa17.97■□□□□ 0.47
TARDBP-225ENST00000621715 ASCC3Q8N3C0 2202 aaKnown RBP17.96■□□□□ 0.47
TARDBP-225ENST00000621715 TNRC6BQ9UPQ9 1833 aaKnown RBP17.96■□□□□ 0.47
TARDBP-225ENST00000621715 A0A087X0B3 334 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 LNP1A1A4G5 178 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 SOBPA7XYQ1 873 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 K7EQS6 105 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 SCAMP3O14828 347 aaKnown RBP17.96■□□□□ 0.47
TARDBP-225ENST00000621715 APBB3O95704 486 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 CKMP06732 381 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 PNPLA4P41247 253 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 PSMC1P62191 440 aaKnown RBP17.96■□□□□ 0.47
TARDBP-225ENST00000621715 CREB5Q02930 508 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 L1TD1Q5T7N2 865 aaKnown RBP17.96■□□□□ 0.47
TARDBP-225ENST00000621715 RNF43Q68DV7 783 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 FAM171BQ6P995 826 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 NT5DC4Q86YG4 428 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 SCN4BQ8IWT1 228 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 ADGRF2Q8IZF7 708 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 CPA6Q8N4T0 437 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 CSGALNACT2Q8N6G5 542 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 GLIS3Q8NEA6 775 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 OR5B17Q8NGF7 314 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 KBTBD7Q8WVZ9 684 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 HVCN1Q96D96 273 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 TPSD1Q9BZJ3 242 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 PCIF1Q9H4Z3 704 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 CRTAC1Q9NQ79 661 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 GDAP2Q9NXN4 497 aa17.96■□□□□ 0.47
TARDBP-225ENST00000621715 TRAV19A0A0A6YYK7 116 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 BCLAF3A2AJT9 711 aaKnown RBP17.95■□□□□ 0.46
TARDBP-225ENST00000621715 C4orf47A7E2U8 309 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 PATE3B3GLJ2 98 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 HUS1O60921 280 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 TOP3BO95985 862 aaKnown RBP17.95■□□□□ 0.46
TARDBP-225ENST00000621715 SEC13P55735 322 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 RPL10AP62906 217 aaKnown RBP17.95■□□□□ 0.46
TARDBP-225ENST00000621715 PSMD2Q13200 908 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 CFAP221Q4G0U5 840 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 LARP1BQ659C4 914 aaKnown RBP17.95■□□□□ 0.46
TARDBP-225ENST00000621715 FAM173BQ6P4H8 233 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 LIMS2Q7Z4I7 341 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 LRRC52Q8N7C0 313 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 USP33Q8TEY7 942 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 EDEM2Q9BV94 578 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 TMEM206Q9H813 350 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 TMEM30AQ9NV96 361 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 WASF3Q9UPY6 502 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 SMC3Q9UQE7 1217 aa17.95■□□□□ 0.46
TARDBP-225ENST00000621715 FREM2Q5SZK8 3169 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 MYO18AQ92614 2054 aaKnown RBP17.94■□□□□ 0.46
TARDBP-225ENST00000621715 GCNT3O95395 438 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 CAVIN2O95810 425 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 KRT19P08727 400 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 USP17L7P0C7H9 530 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 SPINK2P20155 84 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 ABCD1P33897 745 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 IFNAR2P48551 515 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 POSTNQ15063 836 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 FBXO43Q4G163 708 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 C2orf27AQ580R0 203 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 TOP6BLQ8N6T0 577 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 FRMD1Q8N878 549 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 ATP2A3Q93084 1043 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 MYLPFQ96A32 169 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 ACCSQ96QU6 501 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 UXTQ9UBK9 157 aaPredicted RBP17.94■□□□□ 0.46
TARDBP-225ENST00000621715 ITGA11Q9UKX5 1188 aa17.94■□□□□ 0.46
TARDBP-225ENST00000621715 FAM208BQ5VWN6 2430 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 CACNA1EQ15878 2313 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 FRMD3A2A2Y4 597 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 C1QTNF9BB2RNN3 333 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 PRPF6O94906 941 aaKnown RBP17.93■□□□□ 0.46
TARDBP-225ENST00000621715 C1QTNF9P0C862 333 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 HDCP19113 662 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 DGKEP52429 567 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 CACNA2D1P54289 1103 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 AMPD2Q01433 879 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 MYL7Q01449 175 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 PMS2CLQ68D20 193 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 TMEM92Q6UXU6 159 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 BRAPQ7Z569 592 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 RASSF3Q86WH2 238 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 SPATA2LQ8IUW3 424 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-225ENST00000621715 CCDC33Q8N5R6 958 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 MDGA1Q8NFP4 955 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 HPS3Q969F9 1004 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 RNF38Q9H0F5 515 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 ZDHHC4Q9NPG8 344 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 STK17AQ9UEE5 414 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 ARHGAP26Q9UNA1 814 aa17.93■□□□□ 0.46
TARDBP-225ENST00000621715 PI4KAP42356 2102 aa17.92■□□□□ 0.46
TARDBP-225ENST00000621715 LEFTY2O00292 366 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms