RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 FAN1Q9Y2M0 1017 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 MFHAS1Q9Y4C4 1052 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 TRPV2Q9Y5S1 764 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 MDM4O15151 490 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 DDX3YO15523 660 aaKnown RBP11.1□□□□□ -0.63
VPS11-208ENST00000621676 CILPO75339 1184 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 SRGAP2BP0DMP2 458 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 CDH6P55285 790 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 PDCLQ13371 301 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 RFX6Q8HWS3 928 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 SYCE1Q8N0S2 351 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 TXLNBQ8N3L3 684 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 RUFY1Q96T51 708 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.1□□□□□ -0.63
VPS11-208ENST00000621676 TMEM30AQ9NV96 361 aa11.1□□□□□ -0.63
VPS11-208ENST00000621676 ANO9A1A5B4 782 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 KBTBD13C9JR72 458 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 PODXLO00592 558 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ALDH1A1P00352 501 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 P4HA1P13674 534 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 GRM5P41594 1212 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 TAF6P49848 677 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 DR1Q01658 176 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 KIAA0319Q5VV43 1072 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ZNF410Q86VK4 478 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ZNF354CQ86Y25 554 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 TP53INP2Q8IXH6 220 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 GOLGA6L1Q8N7Z2 621 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 RSAD1Q9HA92 442 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 LRRC4Q9HBW1 653 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 KRT82Q9NSB4 513 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 BARX2Q9UMQ3 279 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 SGK1O00141 431 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ERLIN1O75477 346 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 H2AFXP16104 143 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 CYP2F1P24903 491 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 PLA2G4AP47712 749 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 GJA9P57773 515 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 CA9Q16790 459 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 HSP90B2PQ58FF3 399 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 BEND6Q5SZJ8 279 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 MON1BQ7L1V2 547 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 RTN4RL1Q86UN2 441 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 PIGZQ86VD9 579 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 LINC01465Q8N7H1 131 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 GSTCDQ8NEC7 633 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 FBXO25Q8TCJ0 367 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 UBQLN1Q9UMX0 589 aaKnown RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 MBLAC1A4D2B0 266 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 CST8O60676 142 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 DDHD2O94830 711 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 IL18RAPO95256 599 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 TLE2Q04725 743 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 GAD2Q05329 585 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ZNF252P-AS1Q0IIN9 211 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 TMEM173Q86WV6 379 aaPredicted RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 PRELID2Q8N945 189 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 IPO4Q8TEX9 1081 aaKnown RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 PAWRQ96IZ0 340 aaKnown RBP11.09□□□□□ -0.63
VPS11-208ENST00000621676 C9orf72Q96LT7 481 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 ASB7Q9H672 318 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 PARVAQ9NVD7 372 aa11.09□□□□□ -0.63
VPS11-208ENST00000621676 WDR90Q96KV7 1748 aa11.08□□□□□ -0.63
VPS11-208ENST00000621676 C9IYK1 514 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 AP1G2O75843 785 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 RNF8O76064 485 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 MMP8P22894 467 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 TAF2Q6P1X5 1199 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 GPRIN1Q7Z2K8 1008 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.08□□□□□ -0.64
VPS11-208ENST00000621676 FUT8Q9BYC5 575 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 FBXL5Q9UKA1 691 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 LRFN2Q9ULH4 789 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 GOLGA6L10A0A0M3HER8 536 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 TBX18O95935 607 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 MIPP30301 263 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 LMAN1P49257 510 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 LBX1P52954 281 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 SYPL2Q5VXT5 272 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 TRNP1Q6NT89 227 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 CCNI2Q6ZMN8 369 aaPredicted RBP11.08□□□□□ -0.64
VPS11-208ENST00000621676 TAX1BP1Q86VP1 789 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 MIB1Q86YT6 1006 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.08□□□□□ -0.64
VPS11-208ENST00000621676 EMID1Q96A84 441 aaPredicted RBP11.08□□□□□ -0.64
VPS11-208ENST00000621676 HES6Q96HZ4 224 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 CERS4Q9HA82 394 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 DNPEPQ9ULA0 475 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 DAAM1Q9Y4D1 1078 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 PARP14Q460N5 1801 aa11.08□□□□□ -0.64
VPS11-208ENST00000621676 TADA2AO75478 443 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 GZMAP12544 262 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 GRIK1P39086 918 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 PGFP49763 221 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 SNRPFP62306 86 aaKnown RBP11.07□□□□□ -0.64
VPS11-208ENST00000621676 ADAM17P78536 824 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 KRT81Q14533 505 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 FAM171A1Q5VUB5 890 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 FOXR2Q6PJQ5 311 aa11.07□□□□□ -0.64
VPS11-208ENST00000621676 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms