RNA–Protein interactions for RNA: ENST00000621399.1

CIRBP-245, Transcript of cold inducible RNA binding protein, humanhuman

TSL 1 (best)

Gene CIRBP, Length 1,044 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-245ENST00000621399 DPY19L2P1Q6NXN4 242 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 RBBP8NLQ8NC74 664 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-245ENST00000621399 RNF214Q8ND24 703 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 SMARCD1Q96GM5 515 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 HNRNPABQ99729 332 aaKnown RBP19.72■□□□□ 0.75
CIRBP-245ENST00000621399 PHF7Q9BWX1 381 aaPredicted RBP19.72■□□□□ 0.75
CIRBP-245ENST00000621399 PLCB1Q9NQ66 1216 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 RTN4Q9NQC3 1192 aaKnown RBP19.72■□□□□ 0.75
CIRBP-245ENST00000621399 ASAH2Q9NR71 780 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 KIAA1257Q9ULG3 409 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 MTCL1Q9Y4B5 1905 aaKnown RBP19.72■□□□□ 0.75
CIRBP-245ENST00000621399 CLUHO75153 1309 aa19.72■□□□□ 0.75
CIRBP-245ENST00000621399 F8VP50 259 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 RNF225M0QZC1 329 aaPredicted RBP19.71■□□□□ 0.75
CIRBP-245ENST00000621399 AP1G2O75843 785 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 RHOP08100 348 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 PAEPP09466 180 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 FSHRP23945 695 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 USP8P40818 1118 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 CACNA2D1P54289 1103 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 PPP1R26Q5T8A7 1209 aaPredicted RBP19.71■□□□□ 0.75
CIRBP-245ENST00000621399 PDZD4Q76G19 769 aaPredicted RBP19.71■□□□□ 0.75
CIRBP-245ENST00000621399 HS6ST3Q8IZP7 471 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 C8orf48Q96LL4 319 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 KRT82Q9NSB4 513 aa19.71■□□□□ 0.75
CIRBP-245ENST00000621399 FAM207AQ9NSI2 230 aaPredicted RBP19.71■□□□□ 0.75
CIRBP-245ENST00000621399 SLC38A8A6NNN8 435 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 TEX33O43247 280 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 FAM200BP0CF97 657 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 VDRP11473 427 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 MYL4P12829 197 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 UCHL3P15374 230 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 RFX1P22670 979 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 FANCCQ00597 558 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 RAPGEF1Q13905 1077 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 SGO2Q562F6 1265 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 ARHGAP17Q68EM7 881 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 LEMD2Q8NC56 503 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 STKLD1Q8NE28 680 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 RPGRIP1Q96KN7 1286 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 SPATA17Q96L03 361 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 CEP295NLQ96MC4 621 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 NAP1L5Q96NT1 182 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-245ENST00000621399 ERGIC2Q96RQ1 377 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 KCNK16Q96T55 309 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 DMAP1Q9NPF5 467 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-245ENST00000621399 PRKAG3Q9UGI9 489 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 AJAP1Q9UKB5 411 aaPredicted RBP19.7■□□□□ 0.74
CIRBP-245ENST00000621399 CNTN6Q9UQ52 1028 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 SIK3Q9Y2K2 1263 aa19.7■□□□□ 0.74
CIRBP-245ENST00000621399 MRPS23Q9Y3D9 190 aaKnown RBP19.7■□□□□ 0.74
CIRBP-245ENST00000621399 A0A1B0GTH6 734 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 ZNF197O14709 1029 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 CSH1P0DML2 217 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 CSH2P0DML3 217 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 SP100P23497 879 aaPredicted RBP19.69■□□□□ 0.74
CIRBP-245ENST00000621399 ZNF132P52740 706 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 MTMR3Q13615 1198 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 GET4Q7L5D6 327 aaPredicted RBP19.69■□□□□ 0.74
CIRBP-245ENST00000621399 ADHFE1Q8IWW8 467 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 NEK11Q8NG66 645 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 SHC3Q92529 594 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 AVENQ9NQS1 362 aaPredicted RBP19.69■□□□□ 0.74
CIRBP-245ENST00000621399 TMEM30AQ9NV96 361 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 MAGED2Q9UNF1 606 aaPredicted RBP19.69■□□□□ 0.74
CIRBP-245ENST00000621399 FHOD1Q9Y613 1164 aa19.69■□□□□ 0.74
CIRBP-245ENST00000621399 TTC28Q96AY4 2481 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 NOL4O94818 638 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 EPHA5P54756 1037 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 UBASH3AP57075 661 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 MAP3K7CLP57077 242 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 DRAP1Q14919 205 aaPredicted RBP19.68■□□□□ 0.74
CIRBP-245ENST00000621399 SLC5A9Q2M3M2 681 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 GOLGA7BQ2TAP0 167 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 OTOP3Q7RTS5 596 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 TMC8Q8IU68 726 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 ITFG1Q8TB96 612 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 SMOQ99835 787 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 NAA15Q9BXJ9 866 aaKnown RBP19.68■□□□□ 0.74
CIRBP-245ENST00000621399 LRRC3Q9BY71 257 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 DUSP16Q9BY84 665 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 STK33Q9BYT3 514 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 GANQ9H2C0 597 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 CSNK1G1Q9HCP0 422 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 ZNF334Q9HCZ1 680 aaPredicted RBP19.68■□□□□ 0.74
CIRBP-245ENST00000621399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.68■□□□□ 0.74
CIRBP-245ENST00000621399 NR2E1Q9Y466 385 aa19.68■□□□□ 0.74
CIRBP-245ENST00000621399 FOXN3O00409 490 aaPredicted RBP19.67■□□□□ 0.74
CIRBP-245ENST00000621399 BEST1O76090 585 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 FGF19O95750 216 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 CALCAP01258 141 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 HMGA1P17096 107 aaKnown RBP19.67■□□□□ 0.74
CIRBP-245ENST00000621399 NPR3P17342 541 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 GBP2P32456 591 aaPredicted RBP19.67■□□□□ 0.74
CIRBP-245ENST00000621399 CCR2P41597 374 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 POLR2FP61218 127 aaKnown RBP19.67■□□□□ 0.74
CIRBP-245ENST00000621399 NR1I3Q14994 352 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 PRSS36Q5K4E3 855 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 SMYD5Q6GMV2 418 aa19.67■□□□□ 0.74
CIRBP-245ENST00000621399 DENND5BQ6ZUT9 1274 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms