RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 REPS2Q8NFH8 660 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF507Q8TCN5 953 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 BLOC1S5Q8TDH9 187 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ZFP42Q96MM3 310 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CCDC3Q9BQI4 270 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 TAF1DQ9H5J8 278 aaPredicted RBP10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 CAPN10Q9HC96 672 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 ARHGAP26Q9UNA1 814 aa10.19□□□□□ -0.78
CLTCL1-211ENST00000621271 EIF3HO15372 352 aaKnown RBP eCLIP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 PPP1R37O75864 691 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ATP5HO75947 161 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 POLBP06746 335 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 TUFMP49411 452 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SYDE1Q6ZW31 735 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SPATA4Q8NEY3 305 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 VPS37AQ8NEZ2 397 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 AGR3Q8TD06 166 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 HNRNPLLQ8WVV9 542 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 THOC1Q96FV9 657 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ING2Q9H160 280 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 FBXO44Q9H4M3 255 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 MRPL17Q9NRX2 175 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SCHIP1Q9P0W5 487 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 LNPEPQ9UIQ6 1025 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 POLR1AO95602 1720 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 CFAP73A6NFT4 308 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SOCS7O14512 581 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 DARSP14868 501 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ALDH5A1P51649 535 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 LAMTOR4Q0VGL1 99 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 STK4Q13043 487 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 GRAMD1BQ3KR37 738 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 MDH1BQ5I0G3 518 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 FKBP1CQ5VVH2 108 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ANKMY2Q8IV38 441 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 PRPF18Q99633 342 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 FHOD1Q9Y613 1164 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ESYT3A0FGR9 886 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 AXLP30530 894 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NPTX2P47972 431 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 GEMP55040 296 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 MAP3K7CLP57077 242 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NCALDP61601 193 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 LRRC23Q53EV4 343 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 TIGD7Q6NT04 549 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 RD3Q7Z3Z2 195 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 FIBCD1Q8N539 461 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 C1orf131Q8NDD1 294 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ENGASEQ8NFI3 743 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ZNF558Q96NG5 402 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 TMEM60Q9H2L4 133 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NDE1Q9NXR1 346 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 CAPN11Q9UMQ6 739 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 MROH7Q68CQ1 1323 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 CBX4O00257 560 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 ANGPT2O15123 496 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 FOXP2O15409 715 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 H2AFXP16104 143 aaPredicted RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 GALCP54803 685 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 BEX3Q00994 111 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NCAPHQ15003 741 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 CCDC149Q6ZUS6 474 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NECAB2Q7Z6G3 386 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 TMCO5AQ8N6Q1 288 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC35G2Q8TBE7 412 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 AGPAT3Q9NRZ7 376 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 NMRK1Q9NWW6 199 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 TMEM161AQ9NX61 479 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 UTP6Q9NYH9 597 aaKnown RBP10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 SPASTQ9UBP0 616 aa10.18□□□□□ -0.78
CLTCL1-211ENST00000621271 CLASP2O75122 1294 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ITGALP20701 1170 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SPRP35270 261 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ADCYAP1R1P41586 468 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DPYDQ12882 1025 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC27A1Q6PCB7 646 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 C4orf22Q6V702 233 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 RFWD2Q8NHY2 731 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 PNKPQ96T60 521 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 TINF2Q9BSI4 451 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 EPN3Q9H201 632 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DDX43Q9NXZ2 648 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 DBR1Q9UK59 544 aaKnown RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 INTUQ9ULD6 942 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 RNF103-CHMP3A0A140T963 221 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC15A5A6NIM6 579 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SYCE1LA8MT33 242 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 FAM47E-STBD1D6RA91 191 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 UBXN8O00124 270 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 NCKAP1LP55160 1127 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 MTA1Q13330 715 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 PGM5Q15124 567 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SLC18A3Q16572 532 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 MRNIPQ6NTE8 343 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 TC2NQ8N9U0 490 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 FEZF2Q8TBJ5 459 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 PIP4K2CQ8TBX8 421 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 SYT15Q9BQS2 421 aa10.17□□□□□ -0.78
CLTCL1-211ENST00000621271 AGO4Q9HCK5 861 aaKnown RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms