RNA–Protein interactions for RNA: ENST00000621136.4

SYNRG-229, Transcript of synergin gamma, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNRG, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-229ENST00000621136 PDK1Q15118 436 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 TMEM214Q6NUQ4 689 aaKnown RBP13.02□□□□□ -0.33
SYNRG-229ENST00000621136 ZC3H15Q8WU90 426 aaKnown RBP13.02□□□□□ -0.33
SYNRG-229ENST00000621136 MTMR9Q96QG7 549 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 IKZF4Q9H2S9 585 aa13.02□□□□□ -0.33
SYNRG-229ENST00000621136 ERVV-1B6SEH8 477 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CES2O00748 559 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PARNO95453 639 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 TFE3P19532 575 aaPredicted RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 HIBADHP31937 336 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 GSTA3Q16772 222 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 RGS21Q2M5E4 152 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 GPR107Q5VW38 600 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 C11orf63Q6NUN7 778 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 DNAJC24Q6P3W2 148 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CLNKQ7Z7G1 428 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 NOP9Q86U38 636 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ALG3Q92685 438 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 WDR70Q9NW82 654 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 MINPP1Q9UNW1 487 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 POLR2MP0CAP2 368 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CCDC166P0CW27 439 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 BMP3P12645 472 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 VCLP18206 1134 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 TAC1P20366 129 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PEX2P28328 305 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 LSM3P62310 102 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PARP6Q2NL67 630 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 SH3D19Q5HYK7 790 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CYP2R1Q6VVX0 501 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ATG14Q6ZNE5 492 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 DHDDSQ86SQ9 333 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 TTC7BQ86TV6 843 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 AFAP1L2Q8N4X5 818 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CATSPER1Q8NEC5 780 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ARHGEF26Q96DR7 871 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 MAF1Q9H063 256 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PLGRKTQ9HBL7 147 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ZDHHC18Q9NUE0 388 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 BARX2Q9UMQ3 279 aaPredicted RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 EMSYQ7Z589 1322 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 MYH3P11055 1940 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ARHGEF9O43307 516 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 HLA-DOAP06340 250 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 TYK2P29597 1187 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 IL6STP40189 918 aaPredicted RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 STX1BP61266 288 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 UBAP2LQ14157 1087 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CLEC10AQ8IUN9 316 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 DNAAF3Q8N9W5 541 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PHC3Q8NDX5 983 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 TSPAN14Q8NG11 270 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PDCD6IPQ8WUM4 868 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CMTM5Q96DZ9 223 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 RMND5BQ96G75 393 aaPredicted RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 BCAS3Q9H6U6 928 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CHST7Q9NS84 486 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 SOX13Q9UN79 622 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 ANGPTL3Q9Y5C1 460 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 USP17L5A8MUK1 530 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 A8MXQ7 604 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 BANF1O75531 89 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 BCL10O95999 233 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 EIF4BP23588 611 aaKnown RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 KLRC3Q07444 240 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 SLC20A1Q8WUM9 679 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 PKD2L2Q9NZM6 624 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 HACD3Q9P035 362 aa13.01□□□□□ -0.33
SYNRG-229ENST00000621136 CICQ96RK0 1608 aaPredicted RBP13.01□□□□□ -0.33
SYNRG-229ENST00000621136 A0A1W2PPM1 405 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 CAPN15O75808 1086 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 TMEM253P0C7T8 217 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 ZSCAN5DPP0CG00 497 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 KCNA4P22459 653 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 AQP4P55087 323 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 POU5F1Q01860 360 aaKnown RBP13□□□□□ -0.33
SYNRG-229ENST00000621136 ZDHHC24Q6UX98 284 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 ZCCHC7Q8N3Z6 543 aaKnown RBP13□□□□□ -0.33
SYNRG-229ENST00000621136 ZFAND2BQ8WV99 257 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 EFR3BQ9Y2G0 817 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 DNAJC16Q9Y2G8 782 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 RPTORQ8N122 1335 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 FOXN3O00409 490 aaPredicted RBP13□□□□□ -0.33
SYNRG-229ENST00000621136 SEMA3DO95025 777 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 HSPA8P11142 646 aaKnown RBP13□□□□□ -0.33
SYNRG-229ENST00000621136 ALDH1A3P47895 512 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 TAF5Q15542 800 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 SLC45A4Q5BKX6 768 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 TXNRD3Q86VQ6 643 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 ULK2Q8IYT8 1036 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 RASGEF1CQ8N431 466 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 CCNYQ8ND76 341 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 HES6Q96HZ4 224 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 PAFAH2Q99487 392 aa13□□□□□ -0.33
SYNRG-229ENST00000621136 TUBA8Q9NY65 449 aaPredicted RBP13□□□□□ -0.33
SYNRG-229ENST00000621136 GEMIN4P57678 1058 aaKnown RBP13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms