RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 KBTBD13C9JR72 458 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 H3BRJ5 948 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ESRRAP11474 423 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 SFNP31947 248 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 C15orf59Q2T9L4 293 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 ANO7Q6IWH7 933 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 CDHR3Q6ZTQ4 885 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 VSIG10LQ86VR7 867 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 SPDYE1Q8NFV5 336 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 FAM161BQ96MY7 647 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 EURLQ9NYK6 297 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 IL1RAPL1Q9NZN1 696 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 SLC17A6Q9P2U8 582 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 HMGXB4Q9UGU5 601 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 CYTH4Q9UIA0 394 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 MYO18AQ92614 2054 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 MEI4A8MW99 385 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 TYROBPO43914 113 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 UBTFL6P0CB48 400 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 ZCCHC18P0CG32 403 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 RASSF2P50749 326 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ARL4CP56559 192 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 THOC5Q13769 683 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 PSMD6Q15008 389 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 PTPN20Q4JDL3 420 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 SAMD3Q8N6K7 520 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 MCPH1Q8NEM0 835 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ARMC2Q8NEN0 867 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 RILPQ96NA2 401 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 LRMDAQ9H2I8 198 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 PPARGC1AQ9UBK2 798 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 ALOX15BO15296 676 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 SMIM24O75264 130 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 INHBAP08476 426 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 KCNA2P16389 499 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ALDH18A1P54886 795 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 PPP6R3Q5H9R7 873 aaPredicted RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 WDR78Q5VTH9 848 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ARFGAP1Q8N6T3 406 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 TMEM35BQ8NCS4 154 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 PRPF31Q8WWY3 499 aaKnown RBP16.81■□□□□ 0.28
DKC1-213ENST00000620277 USP6NLQ92738 828 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 GRAMD1AQ96CP6 724 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 SYT15Q9BQS2 421 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 ARHGAP28Q9P2N2 729 aa16.81■□□□□ 0.28
DKC1-213ENST00000620277 GREB1LQ9C091 1923 aaPredicted RBP16.8■□□□□ 0.28
DKC1-213ENST00000620277 INO80B-WBP1J3KQ70 363 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 B4GALT5O43286 388 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 KIF1CO43896 1103 aaKnown RBP16.8■□□□□ 0.28
DKC1-213ENST00000620277 GARTP22102 1010 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 MROH9Q5TGP6 573 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 ENOSF1Q7L5Y1 443 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 ARID3BQ8IVW6 561 aaPredicted RBP16.8■□□□□ 0.28
DKC1-213ENST00000620277 PDIK1LQ8N165 341 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 DNAJC9Q8WXX5 260 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 MMP19Q99542 508 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 TRIM55Q9BYV6 548 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 INO80BQ9C086 356 aaPredicted RBP16.8■□□□□ 0.28
DKC1-213ENST00000620277 ST6GALNAC4Q9H4F1 302 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 RAB6BQ9NRW1 208 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 SDAD1Q9NVU7 687 aaKnown RBP eCLIP16.8■□□□□ 0.283e-7■■■■□ 19.8
DKC1-213ENST00000620277 PACSIN3Q9UKS6 424 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 SMNDC1O75940 238 aaKnown RBP eCLIP16.8■□□□□ 0.285e-7■■■□□ 15.2
DKC1-213ENST00000620277 LINGO3P0C6S8 592 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 HSPA1LP34931 641 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 CRADDP78560 199 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 LMNB2Q03252 620 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 CXCL9Q07325 125 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 EML3Q32P44 896 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 ACSBG2Q5FVE4 666 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 RNF149Q8NC42 400 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 NMUR2Q9GZQ4 415 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 ZNF302Q9NR11 478 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 GINS2Q9Y248 185 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 DOCK5Q9H7D0 1870 aa16.8■□□□□ 0.28
DKC1-213ENST00000620277 LRCH4O75427 683 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 USP1O94782 785 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 APRTP07741 180 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 OASLQ15646 514 aaKnown RBP16.79■□□□□ 0.28
DKC1-213ENST00000620277 ZNF699Q32M78 642 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 C15orf39Q6ZRI6 1047 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 UNC5BQ8IZJ1 945 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 AGGF1Q8N302 714 aaeCLIP16.79■□□□□ 0.285e-9■■□□□ 14.5
DKC1-213ENST00000620277 AGR3Q8TD06 166 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 FAF2Q96CS3 445 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 PIWIL1Q96J94 861 aaKnown RBP16.79■□□□□ 0.28
DKC1-213ENST00000620277 CPXM1Q96SM3 734 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 CEP41Q9BYV8 373 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 SMYD3Q9H7B4 428 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 ZNRF3Q9ULT6 936 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 CXorf49A8MYA2 514 aaPredicted RBP16.79■□□□□ 0.28
DKC1-213ENST00000620277 TRIM49D1C9J1S8 452 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 WDR46O15213 610 aaKnown RBP16.79■□□□□ 0.28
DKC1-213ENST00000620277 LYPLA2O95372 231 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 AMPD1P23109 780 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 CDH6P55285 790 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 POLE2P56282 527 aa16.79■□□□□ 0.28
DKC1-213ENST00000620277 MORF4L2Q15014 288 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms