RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 FAAP100Q0VG06 881 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 BST1Q10588 318 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 BMPR2Q13873 1038 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 ANKRD20A4Q4UJ75 823 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 DPY19L2P1Q6NXN4 242 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 PPP1R2P3Q6NXS1 205 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 C16orf87Q6PH81 154 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 SYDE1Q6ZW31 735 aaPredicted RBP10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 PDIK1LQ8N165 341 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 ZCCHC9Q8N567 271 aaKnown RBP10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 ATP11CQ8NB49 1132 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 E2F7Q96AV8 911 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 MAF1Q9H063 256 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 JMJD4Q9H9V9 463 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 POLLQ9UGP5 575 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 ADAMTS6Q9UKP5 1117 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 SOX13Q9UN79 622 aa10.21□□□□□ -0.77
TNFAIP3-210ENST00000620204 NUP188Q5SRE5 1749 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 PAPPAQ13219 1627 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 IQANK1A0A1B0GTG1 560 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 GTPBP10A4D1E9 387 aaKnown RBP10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 TRIM49D1C9J1S8 452 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 E5RJQ4 531 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 DGKIO75912 1065 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 LDHCP07864 332 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 SLURP2P0DP57 97 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 TM4SF1P30408 202 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 STT3AP46977 705 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 PRAMEP78395 509 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 KRT80Q6KB66 452 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 LRRC43Q8N309 656 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 LZICQ8WZA0 190 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 EIF2AK1Q9BQI3 630 aaKnown RBP10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 CBWD1Q9BRT8 395 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 ARMC7Q9H6L4 198 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 UVRAGQ9P2Y5 699 aa10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 APOBEC2Q9Y235 224 aaKnown RBP10.21□□□□□ -0.78
TNFAIP3-210ENST00000620204 AIM2O14862 343 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 CYP11B1P15538 503 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 CRABP2P29373 138 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 MAPK10P53779 464 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 MAP3K10Q02779 954 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 SLC15A2Q16348 729 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 ANKRD23Q86SG2 305 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 AZIN2Q96A70 460 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 EBF4Q9BQW3 602 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 MAD1L1Q9Y6D9 718 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 PIK3R2O00459 728 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 BBOX1O75936 387 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 FAM155BO75949 473 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 SEC24DO94855 1032 aaPredicted RBP10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 POLR2MP0CAP2 368 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 ATP2B4P23634 1241 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 LPIN1Q14693 890 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 NRF1Q16656 503 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 C6orf52Q5T4I8 152 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 DPY19L2Q6NUT2 758 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 UTS2BQ765I0 119 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 LPCAT2Q7L5N7 544 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 POLNQ7Z5Q5 900 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 PDSS2Q86YH6 399 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 THAP11Q96EK4 314 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 USP29Q9HBJ7 922 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 RRN3Q9NYV6 651 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 TCEAL9Q9UHQ7 104 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 TLR3O15455 904 aaKnown RBP10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 TYROBPO43914 113 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 CFBP00751 764 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 PDGFRBP09619 1106 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 LMNB2Q03252 620 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 GK3PQ14409 553 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 MYLK3Q32MK0 819 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 RHOT1Q8IXI2 618 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 NEDD1Q8NHV4 660 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 NT5C1BQ96P26 610 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 GPR88Q9GZN0 384 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 VPS11Q9H270 941 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 THEGQ9P2T0 379 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
TNFAIP3-210ENST00000620204 F8W8V4 182 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 DNALI1O14645 258 aaPredicted RBP10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 RPA1P27694 616 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 ALDH1A3P47895 512 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 HDAC4P56524 1084 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 TAS2R40P59535 323 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 MRPS22P82650 360 aaKnown RBP10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 ORC2Q13416 577 aaPredicted RBP10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 CCNG2Q16589 344 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 C6orf183Q5T699 404 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 LIN9Q5TKA1 542 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 ATG16L1Q676U5 607 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 MIER3Q7Z3K6 550 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 FBXO33Q7Z6M2 555 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 WDR75Q8IWA0 830 aaKnown RBP10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 ZSWIM2Q8NEG5 633 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 ZNF398Q8TD17 642 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 FAM172AQ8WUF8 416 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 MMP19Q99542 508 aa10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 COPS7BQ9H9Q2 264 aaPredicted RBP10.19□□□□□ -0.78
TNFAIP3-210ENST00000620204 TCEA3O75764 348 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms