RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	CTAGE3P	Q8IX95	158 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RIBC1	Q8N443	379 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	FAM71D	Q8N9W8	422 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNF75CP	Q92670	426 aa	Predicted RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	GPRASP2	Q96D09	838 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	EPAS1	Q99814	870 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	CISH	Q9NSE2	258 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	EURL	Q9NYK6	297 aa		15.17	■□□□□ 0.02
SMTN-223	ENST00000619644	RPL26L1	Q9UNX3	145 aa	Known RBP	15.17	■□□□□ 0.02
SMTN-223	ENST00000619644		H0YCG3	227 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SMAP	O00193	183 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	RFC1	P35251	1148 aa	Predicted RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	YWHAG	P61981	247 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNF252P-AS1	Q0IIN9	211 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	FNBP1L	Q5T0N5	605 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	NLRP9	Q7RTR0	991 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	CCDC125	Q86Z20	511 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	TMEM130	Q8N3G9	435 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	TCP10L	Q8TDR4	215 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	TMEM174	Q8WUU8	243 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SCG3	Q8WXD2	468 aa	Known RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	GML	Q99445	158 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	PDGFD	Q9GZP0	370 aa	Predicted RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SMG5	Q9UPR3	1016 aa	Known RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	EDN1	P05305	212 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	CALB1	P05937	261 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	CD48	P09326	243 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	TROVE2	P10155	538 aa	Known RBP eCLIP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SKI	P12755	728 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	KCNA3	P22001	575 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	GEMIN4	P57678	1058 aa	Known RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SP2	Q02086	613 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	MORF4L2	Q15014	288 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	MSS51	Q4VC12	460 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SLFN12L	Q6IEE8	588 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	DSTYK	Q6XUX3	929 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	KCTD6	Q8NC69	237 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	LRRN4	Q8WUT4	740 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	NRG4	Q8WWG1	115 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	EZH1	Q92800	747 aa	Predicted RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	TRAPPC9	Q96Q05	1148 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	PAFAH2	Q99487	392 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	DEFB129	Q9H1M3	183 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	METTL5	Q9NRN9	209 aa	Known RBP	15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	SLC17A7	Q9P2U7	560 aa		15.16	■□□□□ 0.02
SMTN-223	ENST00000619644	hCG_1818297	A0A087WSY0	165 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	C2orf71	A6NGG8	1288 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PHB	P35232	272 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	ARL4C	P56559	192 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PTP4A2	Q12974	167 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CUL3	Q13618	768 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PDK4	Q16654	411 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	MAPK6	Q16659	721 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	NBPF12	Q5TAG4	269 aa	Predicted RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	B4GALNT2	Q8NHY0	566 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PPP1R16B	Q96T49	567 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CGRRF1	Q99675	332 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	TLE6	Q9H808	572 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	GJA3	Q9Y6H8	435 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	TCRBV7S3A2	A0A539	114 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	KRT36	O76013	467 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	FGFR1	P11362	822 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	KRT3	P12035	628 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	RXRB	P28702	533 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	FSTL1	Q12841	308 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CDO1	Q16878	200 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	RNASEH2B	Q5TBB1	312 aa	Known RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	DENND1A	Q8TEH3	1009 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PCMTD2	Q9NV79	361 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	LDHA	P00338	332 aa	Known RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CACNA2D1	P54289	1103 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CDH8	P55286	799 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	GPX6	P59796	221 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	PSMC1	P62191	440 aa	Known RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	ARMC3	Q5W041	872 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	LRRC6	Q86X45	466 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	LRRC71	Q8N4P6	559 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	RFWD2	Q8NHY2	731 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	JOSD2	Q8TAC2	188 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	TFAP2B	Q92481	460 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	VCPIP1	Q96JH7	1222 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	CADM1	Q9BY67	442 aa	Known RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	XPO7	Q9UIA9	1087 aa	Known RBP	15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	ZNRF3	Q9ULT6	936 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	NUMBL	Q9Y6R0	609 aa		15.15	■□□□□ 0.02
SMTN-223	ENST00000619644	STBD1	O95210	358 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	MT-ND3	P03897	115 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	ABHD2	P08910	425 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	GSTA2	P09210	222 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	SUPT20HL2	P0C7V6	817 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	TAF5	Q15542	800 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	ZNF699	Q32M78	642 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	TBC1D25	Q3MII6	688 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	SUPT20HL1	Q3ZLR7	823 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	ABHD15	Q6UXT9	468 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	RGS9BP	Q6ZS82	235 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	ATP11C	Q8NB49	1132 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	WRNIP1	Q96S55	665 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	PICK1	Q9NRD5	415 aa		15.14	■□□□□ 0.01
SMTN-223	ENST00000619644	LNPEP	Q9UIQ6	1025 aa		15.14	■□□□□ 0.01

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms