RNA–Protein interactions for RNA: ENST00000619530.1

LINC00221-202, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,499 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-202ENST00000619530 RPL13P26373 211 aaKnown RBP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 VAMP7P51809 220 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 CLDN10P78369 228 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 MAPRE1Q15691 268 aaKnown RBP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 STX1AQ16623 288 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 CFAP221Q4G0U5 840 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 TXNDC8Q6A555 127 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 ZNF852Q6ZMS4 543 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 TTC16Q8NEE8 873 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 MYCBPAPQ8TBZ2 947 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 CSGALNACT1Q8TDX6 532 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 TMEM174Q8WUU8 243 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 MRPS31Q92665 395 aaKnown RBP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 EEF2KMTQ96G04 330 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 PCED1BQ96HM7 432 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 FUBP3Q96I24 572 aaKnown RBP eCLIP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 ZFYVE19Q96K21 471 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 CBX8Q9HC52 389 aa16.71■□□□□ 0.27
LINC00221-202ENST00000619530 NDRG2Q9UN36 371 aaKnown RBP16.71■□□□□ 0.27
LINC00221-202ENST00000619530 CACNA1HO95180 2353 aa16.71■□□□□ 0.26
LINC00221-202ENST00000619530 ZNF638Q14966 1978 aaKnown RBP16.7■□□□□ 0.26
LINC00221-202ENST00000619530 AKAP3O75969 853 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 NOL4O94818 638 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 STAU1O95793 577 aaKnown RBP16.7■□□□□ 0.26
LINC00221-202ENST00000619530 TRIM49P0CI25 452 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 TRIM49CP0CI26 452 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 KRT13P13646 458 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 ANXA13P27216 316 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 PSMC2P35998 433 aaKnown RBP16.7■□□□□ 0.26
LINC00221-202ENST00000619530 MAGEA11P43364 429 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 KPNA1P52294 538 aaPredicted RBP16.7■□□□□ 0.26
LINC00221-202ENST00000619530 SGSM1Q2NKQ1 1148 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 SV2AQ7L0J3 742 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 FAM186BQ8IYM0 893 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 BCO2Q9BYV7 579 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 TRPC7Q9HCX4 862 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 LTB4R2Q9NPC1 389 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 RMND1Q9NWS8 449 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 UXTQ9UBK9 157 aaPredicted RBP16.7■□□□□ 0.26
LINC00221-202ENST00000619530 MIA3Q5JRA6 1907 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 TICRRQ7Z2Z1 1910 aa16.7■□□□□ 0.26
LINC00221-202ENST00000619530 CLDN5O00501 218 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 ZNF500O60304 480 aaPredicted RBP16.69■□□□□ 0.26
LINC00221-202ENST00000619530 SMC2O95347 1197 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 FAM163BP0C2L3 166 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 AVPR1AP37288 418 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 PIK3CAP42336 1068 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 GCLMP48507 274 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 ZACNQ401N2 412 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 C1orf220Q5T0J3 134 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 ISM2Q6H9L7 571 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 SPOPLQ6IQ16 392 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 CMTM8Q8IZV2 173 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 SMARCE1Q969G3 411 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 NELL2Q99435 816 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 SDCBP2Q9H190 292 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 SPATA6Q9NWH7 488 aaPredicted RBP16.69■□□□□ 0.26
LINC00221-202ENST00000619530 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.69■□□□□ 0.26
LINC00221-202ENST00000619530 DLGAP2Q9P1A6 1054 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 HOOK1Q9UJC3 728 aaKnown RBP16.69■□□□□ 0.26
LINC00221-202ENST00000619530 MRPS17Q9Y2R5 130 aaKnown RBP16.69■□□□□ 0.26
LINC00221-202ENST00000619530 PIAS3Q9Y6X2 628 aa16.69■□□□□ 0.26
LINC00221-202ENST00000619530 MAN2B1O00754 1011 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 IKBKBO14920 756 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 CHADO15335 359 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 HLA-DRAP01903 254 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 P4HA1P13674 534 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 TARSP26639 723 aaKnown RBP16.68■□□□□ 0.26
LINC00221-202ENST00000619530 PRCPP42785 496 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 PLCB2Q00722 1185 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 ORC1Q13415 861 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 VSTM1Q6UX27 236 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 INTS8Q75QN2 995 aaKnown RBP16.68■□□□□ 0.26
LINC00221-202ENST00000619530 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 MON1AQ86VX9 555 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 CELF5Q8N6W0 485 aaKnown RBP16.68■□□□□ 0.26
LINC00221-202ENST00000619530 BPIFB1Q8TDL5 484 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 FAM3CQ92520 227 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 CYP2S1Q96SQ9 504 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 MED10Q9BTT4 135 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 B3GNT5Q9BYG0 378 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 THG1LQ9NWX6 298 aaKnown RBP16.68■□□□□ 0.26
LINC00221-202ENST00000619530 CCL26Q9Y258 94 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 PCDHA5Q9Y5H7 936 aa16.68■□□□□ 0.26
LINC00221-202ENST00000619530 CCNE1P24864 410 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 DDX6P26196 483 aaKnown RBP eCLIP16.67■□□□□ 0.26
LINC00221-202ENST00000619530 SOX9P48436 509 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 PPP3CAQ08209 521 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 FCHO2Q0JRZ9 810 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 NFIL3Q16649 462 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 ARHGAP29Q52LW3 1261 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 ZNF658Q5TYW1 1059 aaPredicted RBP16.67■□□□□ 0.26
LINC00221-202ENST00000619530 LUZP1Q86V48 1076 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 C1orf210Q8IVY1 113 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 B3GALNT2Q8NCR0 500 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 USP13Q92995 863 aaPredicted RBP16.67■□□□□ 0.26
LINC00221-202ENST00000619530 TRMT2BQ96GJ1 504 aaKnown RBP16.67■□□□□ 0.26
LINC00221-202ENST00000619530 SPATA17Q96L03 361 aa16.67■□□□□ 0.26
LINC00221-202ENST00000619530 MYRFLQ96LU7 910 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms