RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 ASPGQ86U10 573 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 UNC45BQ8IWX7 931 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 LRRC34Q8IZ02 419 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RUBCNQ92622 972 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DDX17Q92841 729 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TRIM43Q96BQ3 446 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SPDL1Q96EA4 605 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DMRTB1Q96MA1 342 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 NLRP4Q96MN2 994 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HINFPQ9BQA5 517 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RUSC1Q9BVN2 902 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ACAT2Q9BWD1 397 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TSPAN10Q9H1Z9 355 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 AZI2Q9H6S1 392 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PARVBQ9HBI1 364 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 GALNT8Q9NY28 637 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HMG20BQ9P0W2 317 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ATXN2Q99700 1313 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 A6NNZ2 444 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 POTECB2RU33 542 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DDX39AO00148 427 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TRAF5O00463 557 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SMNDC1O75940 238 aaKnown RBP eCLIP4.3□□□□□ -1.723e-7■□□□□ 8.1
UBE2D3-233ENST00000618836 KCNH1O95259 989 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 UBTFL6P0CB48 400 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ATP1A3P13637 1013 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ANXA8P13928 327 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 JUNDP17535 347 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RHCEP18577 417 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 NFKBIAP25963 317 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CCR3P51677 355 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ASIC1P78348 528 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RHDQ02161 417 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 GALNT3Q14435 633 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 NONOQ15233 471 aaKnown RBP eCLIP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ANXA8L1Q5VT79 327 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 B3GNT9Q6UX72 402 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CCDC121Q6ZUS5 278 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TRIM50Q86XT4 487 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 FAM178BQ8IXR5 827 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TRMT44Q8IYL2 757 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HACE1Q8IYU2 909 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DDI1Q8WTU0 396 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ATP2A3Q93084 1043 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 VCPIP1Q96JH7 1222 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PGBD1Q96JS3 809 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TMEM68Q96MH6 324 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC4A5Q9BY07 1137 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 LSG1Q9H089 658 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 C1orf21Q9H246 121 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ANTXR1Q9H6X2 564 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 IFT22Q9H7X7 185 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TLR7Q9NYK1 1049 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 LRFN2Q9ULH4 789 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CBY1Q9Y3M2 126 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DOT1LQ8TEK3 1739 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DOK2O60496 412 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RBBP9O75884 186 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SLU7O95391 586 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CYP1A1P04798 512 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 POU2F1P14859 743 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HOXB8P17481 243 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ACTN2P35609 894 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ACAA2P42765 397 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 DSC2Q02487 901 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 MBTPS1Q14703 1052 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HERC3Q15034 1050 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HADHQ16836 314 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ODF2Q5BJF6 829 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 C1orf53Q5VUE5 145 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TTC5Q8N0Z6 440 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CPLX3Q8WVH0 158 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF653Q96CK0 615 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CABS1Q96KC9 395 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 AIFM3Q96NN9 605 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 JPH2Q9BR39 696 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HGH1Q9BTY7 390 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CCSER1Q9C0I3 900 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PUS7LQ9H0K6 701 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SUCLA2Q9P2R7 463 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TBC1D29Q9UFV1 150 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CNOT11Q9UKZ1 510 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PCOLCE2Q9UKZ9 415 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RNF112Q9ULX5 631 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 JAG2Q9Y219 1238 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CLDN16Q9Y5I7 305 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 C15orf38-AP3S2A0A0A6YYH1 394 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 FZD9O00144 591 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 NDUFA2O43678 99 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 FZD6O60353 706 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 KERAO60938 352 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 PSAPP07602 524 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 SRGAP2CP0DJJ0 459 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 TXNP10599 105 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 KCNA5P22460 613 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 GARSP41250 739 aaKnown RBP4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CYP4F2P78329 520 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 ABATP80404 500 aa4.29□□□□□ -1.72
UBE2D3-233ENST00000618836 CYP4F3Q08477 520 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms