RNA–Protein interactions for RNA: ENST00000617771.5

VEGFA-228, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-228ENST00000617771 PTPN1P18031 435 aaKnown RBP26.9■■□□□ 1.9
VEGFA-228ENST00000617771 CCNE1P24864 410 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 ANXA13P27216 316 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 NFIL3Q16649 462 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 GUF1Q8N442 669 aaKnown RBP26.9■■□□□ 1.9
VEGFA-228ENST00000617771 ZFYVE19Q96K21 471 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 TDP1Q9NUW8 608 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 EHD2Q9NZN4 543 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 FBXO4Q9UKT5 387 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 MYO15AQ9UKN7 3530 aa26.9■■□□□ 1.9
VEGFA-228ENST00000617771 P4HA1P13674 534 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 NR2F2P24468 414 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 FZD5Q13467 585 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 MAML2Q8IZL2 1156 aaPredicted RBP26.89■■□□□ 1.9
VEGFA-228ENST00000617771 ZNF687Q8N1G0 1237 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 IER2Q9BTL4 223 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 SEMA4AQ9H3S1 761 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 MAPK8IP1Q9UQF2 711 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 NME7Q9Y5B8 376 aa26.89■■□□□ 1.9
VEGFA-228ENST00000617771 USP34Q70CQ2 3546 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 IKBKBO14920 756 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 TADA3O75528 432 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 RPL13P26373 211 aaKnown RBP26.88■■□□□ 1.89
VEGFA-228ENST00000617771 DLG4P78352 724 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 ZNF268Q14587 947 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-228ENST00000617771 ZNF528Q3MIS6 628 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 ZACNQ401N2 412 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 DENND5BQ6ZUT9 1274 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 B3GALNT2Q8NCR0 500 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 USP13Q92995 863 aaPredicted RBP26.88■■□□□ 1.89
VEGFA-228ENST00000617771 ELOVL4Q9GZR5 314 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 DPEP3Q9H4B8 488 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 SMYD3Q9H7B4 428 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 TRPC7Q9HCX4 862 aa26.88■■□□□ 1.89
VEGFA-228ENST00000617771 VNN1O95497 513 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 SGSM1Q2NKQ1 1148 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 RALGPS2Q86X27 583 aaPredicted RBP26.87■■□□□ 1.89
VEGFA-228ENST00000617771 C8orf48Q96LL4 319 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 CHRDQ9H2X0 955 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 LMAN1LQ9HAT1 526 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 GTSE1Q9NYZ3 720 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 CCL26Q9Y258 94 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 R4GN57 208 aa26.87■■□□□ 1.89
VEGFA-228ENST00000617771 TRAV19A0A0A6YYK7 116 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 SPECC1L-ADORA2AF8WAN1 911 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 SOX9P48436 509 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 VAMP7P51809 220 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 CDH8P55286 799 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 CSTF1Q05048 431 aaKnown RBP26.86■■□□□ 1.89
VEGFA-228ENST00000617771 INTS8Q75QN2 995 aaKnown RBP26.86■■□□□ 1.89
VEGFA-228ENST00000617771 SV2AQ7L0J3 742 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 FMR1NBQ8N0W7 255 aaPredicted RBP26.86■■□□□ 1.89
VEGFA-228ENST00000617771 TTC8Q8TAM2 541 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 TAF4BQ92750 862 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 TNIP3Q96KP6 325 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 RMND1Q9NWS8 449 aa26.86■■□□□ 1.89
VEGFA-228ENST00000617771 DMDP11532 3685 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 F8VP50 259 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 USP17L7P0C7H9 530 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 KRT13P13646 458 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 CTHP32929 405 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 ENPEPQ07075 957 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 TNK2Q07912 1038 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 LRRC32Q14392 662 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 ITPRIPL2Q3MIP1 535 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 CC2D1AQ6P1N0 951 aaPredicted RBP26.85■■□□□ 1.89
VEGFA-228ENST00000617771 SCARA5Q6ZMJ2 495 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 GKN1Q9NS71 199 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 PATJQ8NI35 1801 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 ATP8B3O60423 1300 aa26.85■■□□□ 1.89
VEGFA-228ENST00000617771 DENND4CQ5VZ89 1909 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 AKAP3O75969 853 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 CKMP06732 381 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 CHRNB1P11230 501 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 PSMC2P35998 433 aaKnown RBP26.84■■□□□ 1.89
VEGFA-228ENST00000617771 PIK3CAP42336 1068 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 RAP1GAPP47736 663 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 PDE6CP51160 858 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 NOP14P78316 857 aaKnown RBP26.84■■□□□ 1.89
VEGFA-228ENST00000617771 FAM160A1Q05DH4 1040 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 MTAPQ13126 283 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 ADAM9Q13443 819 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 PNOCQ13519 176 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 FAM186BQ8IYM0 893 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 FAM83CQ9BQN1 747 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 TTLL2Q9BWV7 592 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 TRPM5Q9NZQ8 1165 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 OBSL1O75147 1896 aa26.84■■□□□ 1.89
VEGFA-228ENST00000617771 LMNAP02545 664 aaKnown RBP26.83■■□□□ 1.89
VEGFA-228ENST00000617771 PPP3CCP48454 512 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 PPP2R5DQ14738 602 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 C1orf220Q5T0J3 134 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 B3GNT5Q9BYG0 378 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 IMPG2Q9BZV3 1241 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 ZNF518BQ9C0D4 1074 aa26.83■■□□□ 1.89
VEGFA-228ENST00000617771 PRMT8Q9NR22 394 aaPredicted RBP26.83■■□□□ 1.89
VEGFA-228ENST00000617771 CLDN5O00501 218 aa26.82■■□□□ 1.88
VEGFA-228ENST00000617771 ASS1P00966 412 aaKnown RBP26.82■■□□□ 1.88
VEGFA-228ENST00000617771 HLA-DRAP01903 254 aa26.82■■□□□ 1.88
VEGFA-228ENST00000617771 PFKLP17858 780 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms