RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 ATF7P17544 494 aaPredicted RBP7.7□□□□□ -1.18
PDE6A-205ENST00000617647 MPP2Q14168 576 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 E2F2Q14209 437 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 NONOQ15233 471 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDE6A-205ENST00000617647 SF3B4Q15427 424 aaKnown RBP eCLIP7.7□□□□□ -1.18
PDE6A-205ENST00000617647 CDH24Q86UP0 819 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 ZNF410Q86VK4 478 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 GRAMD2AQ8IUY3 354 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 TCP10LQ8TDR4 215 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 BAP1Q92560 729 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 LARP4BQ92615 738 aaKnown RBP7.7□□□□□ -1.18
PDE6A-205ENST00000617647 MCRS1Q96EZ8 462 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 PWWP2AQ96N64 755 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 SENP7Q9BQF6 1050 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 NUDT12Q9BQG2 462 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 HERC2P3Q9BVR0 1158 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 AS3MTQ9HBK9 375 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 HMG20AQ9NP66 347 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 PKD2L2Q9NZM6 624 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 CHORDC1Q9UHD1 332 aaPredicted RBP7.7□□□□□ -1.18
PDE6A-205ENST00000617647 PLEKHG1Q9ULL1 1385 aa7.7□□□□□ -1.18
PDE6A-205ENST00000617647 POTEB3A0JP26 581 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SNPHO15079 494 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 FBXO21O94952 628 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 PLEKHA8P1O95397 391 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SLC9A1P19634 815 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 GRK2P25098 689 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 GRIA2P42262 883 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 GPC3P51654 580 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RAD23AP54725 363 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 NME3Q13232 169 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 MTM1Q13496 603 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 TGFBIQ15582 683 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ZNF362Q5T0B9 420 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RINT1Q6NUQ1 792 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 POTEBQ6S5H4 581 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 TMC7Q7Z402 723 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 THEMISQ8N1K5 641 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 MYO1HQ8N1T3 1032 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 PDCD6IPQ8WUM4 868 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 HTRA1Q92743 480 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RMDN1Q96DB5 314 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ING2Q9H160 280 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 MOV10Q9HCE1 1003 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 C8orf4Q9NR00 106 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ADA2Q9NZK5 511 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 GNPTGQ9UJJ9 305 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ABCC6O95255 1503 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 M0R3G1 203 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SPAG6O75602 509 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 BMP10O95393 424 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CRTAMO95727 393 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 C6orf222P0C671 652 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ENO3P13929 434 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 BFSP2Q13515 415 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SLC1A5Q15758 541 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 GEN1Q17RS7 908 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 FSCBQ5H9T9 825 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RWDD4Q6NW29 188 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 PAOXQ6QHF9 649 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RFPL4BQ6ZWI9 263 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SETD3Q86TU7 594 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CDR2LQ86X02 465 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 FAM20CQ8IXL6 584 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 IFNL3Q8IZI9 196 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 DEPDC4Q8N2C3 294 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CLIP4Q8N3C7 705 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ZSWIM2Q8NEG5 633 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ST13P5Q8NFI4 369 aaPredicted RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ATG4AQ8WYN0 398 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CCDC90BQ9GZT6 254 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RETREG1Q9H6L5 497 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ZDHHC18Q9NUE0 388 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 TMEM59LQ9UK28 342 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 PNPLA7Q6ZV29 1317 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ZMYM2Q9UBW7 1377 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CLASP2O75122 1294 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 KLHL2O95198 593 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 HOXB7P09629 217 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RARBP10826 455 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 UCHL3P15374 230 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 KRT20P35900 424 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 DRG2P55039 364 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SUZ12Q15022 739 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 LRRC24Q50LG9 513 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 NEPROQ6NW34 567 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 TTC27Q6P3X3 843 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 LDHAL6AQ6ZMR3 332 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 AHI1Q8N157 1196 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CMTM5Q96DZ9 223 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SEMA6BQ9H3T3 888 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 RPRD1BQ9NQG5 326 aaKnown RBP7.69□□□□□ -1.18
PDE6A-205ENST00000617647 WHRNQ9P202 907 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 ATP6V1HQ9UI12 483 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 UTYO14607 1347 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 CPS1P31327 1500 aa7.69□□□□□ -1.18
PDE6A-205ENST00000617647 SIGLEC16A6NMB1 481 aa7.68□□□□□ -1.18
PDE6A-205ENST00000617647 TRAFD1O14545 582 aaPredicted RBP7.68□□□□□ -1.18
PDE6A-205ENST00000617647 CALUO43852 315 aaPredicted RBP7.68□□□□□ -1.18
PDE6A-205ENST00000617647 FUCA1P04066 466 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms