RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 CCNG2Q16589 344 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 OR2W6PQ8NHA6 318 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 GDAP2Q9NXN4 497 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 ATP8A1Q9Y2Q0 1164 aa18.26■□□□□ 0.51
PCDHGC3-205ENST00000617641 CASP8AP2Q9UKL3 1982 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 GRIN2DO15399 1336 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 GOLGA6CA6NDK9 693 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 GOLGA6DP0CG33 693 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 PNPLA4P41247 253 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 TRIP13Q15645 432 aaPredicted RBP18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 KCNT1Q5JUK3 1230 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 TRNP1Q6NT89 227 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 HOMER3Q9NSC5 361 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 FAM105AQ9NUU6 356 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 GOLGA6AQ9NYA3 693 aa18.25■□□□□ 0.51
PCDHGC3-205ENST00000617641 PPFIA2O75334 1257 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 GRAP2O75791 330 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 CCDC130P13994 396 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 GNL1P36915 607 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 MGAT3Q09327 533 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 MTMR3Q13615 1198 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 SV2CQ496J9 727 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 POLNQ7Z5Q5 900 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 KLHDC9Q8NEP7 349 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 APPL2Q8NEU8 664 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 ATL2Q8NHH9 583 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 GRK7Q8WTQ7 553 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 EXOC4Q96A65 974 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 PPP1R10Q96QC0 940 aaKnown RBP18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 CACNG4Q9UBN1 327 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 HESX1Q9UBX0 185 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 ASIC3Q9UHC3 531 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 PCSK1NQ9UHG2 260 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 hCG_1818297A0A087WSY0 165 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 H0YGN5 161 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 IGFBP6P24592 240 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 GBP1P32455 592 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 THPOP40225 353 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 CDKN2BP42772 138 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 LILRA4P59901 499 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 COPS2P61201 443 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 TFDP3Q5H9I0 405 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 CCSAPQ6IQ19 270 aaPredicted RBP18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 LPPQ93052 612 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 SNX25Q9H3E2 840 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 AGO3Q9H9G7 860 aaKnown RBP18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 NFS1Q9Y697 457 aa18.24■□□□□ 0.51
PCDHGC3-205ENST00000617641 C3orf70A6NLC5 250 aaPredicted RBP18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 TJP3O95049 919 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 ADORA2BP29275 332 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 MLH1P40692 756 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 AFF1P51825 1210 aaKnown RBP18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 PTK6Q13882 451 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 HADHQ16836 314 aaKnown RBP18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 CEP85LQ5SZL2 805 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 SH3PXD2AQ5TCZ1 1133 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 ARHGAP17Q68EM7 881 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 SLC35F5Q8WV83 523 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 ART4Q93070 314 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 CAPNS2Q96L46 248 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 C2CD4BA6NLJ0 364 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 GABBR2O75899 941 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 GAS8O95995 478 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 KRT7P08729 469 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 GPD1P21695 349 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 MIPP30301 263 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 PTPN7P35236 360 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 DMTNQ08495 405 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 TAF5Q15542 800 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 PTGISQ16647 500 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 RAB6CQ53S08 254 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 LRIG3Q6UXM1 1119 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 LIMS2Q7Z4I7 341 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 ADGRF2Q8IZF7 708 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 RXFP2Q8WXD0 754 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 HAUS1Q96CS2 278 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 GAD1Q99259 594 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 SLC4A5Q9BY07 1137 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 MIS12Q9H081 205 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 RAB6CQ9H0N0 254 aa18.23■□□□□ 0.51
PCDHGC3-205ENST00000617641 HUS1O60921 280 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 SETSIPP0DME0 302 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 LRPAP1P30533 357 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 VPS41P49754 854 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 ZNF143P52747 638 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 CALCOCO2Q13137 446 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 C15orf59Q2T9L4 293 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 KCTD16Q68DU8 428 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 OLFML1Q6UWY5 402 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 SYDE1Q6ZW31 735 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 ZNF771Q7L3S4 317 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 OSTM1Q86WC4 334 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 CRYBG2Q8N1P7 616 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 GSTCDQ8NEC7 633 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 ASNSD1Q9NWL6 643 aa18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 MTRF1LQ9UGC7 380 aaKnown RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 FEZ2Q9UHY8 353 aaPredicted RBP18.22■□□□□ 0.51
PCDHGC3-205ENST00000617641 NEU2Q9Y3R4 380 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms