RNA–Protein interactions for RNA: ENST00000617209.1

SRGAP2C-205, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-205ENST00000617209 MFSD6LQ8IWD5 586 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 TTC39CQ8N584 583 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 DEPDC1BQ8WUY9 529 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 ELMO3Q96BJ8 720 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 GBP4Q96PP9 640 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 B3GNT5Q9BYG0 378 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 NIF3L1Q9GZT8 377 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 SLITRK6Q9H5Y7 841 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 APOBEC3GQ9HC16 384 aaKnown RBP16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 OBP2AQ9NY56 170 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 HCN4Q9Y3Q4 1203 aa16.47■□□□□ 0.23
SRGAP2C-205ENST00000617209 KMT2EQ8IZD2 1858 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 MUC6Q6W4X9 2439 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 KRBA1A5PL33 1030 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 CLSTN1O94985 981 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 TRIM21P19474 475 aaKnown RBP16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 STARD6P59095 220 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 CBWD6Q4V339 395 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 WDR44Q5JSH3 913 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 CBWD3Q5JTY5 395 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 CBWD5Q5RIA9 395 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 STXBP5Q5T5C0 1151 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 GPR158Q5T848 1215 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 SDHAF4Q5VUM1 108 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 VITQ6UXI7 678 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 SCARA5Q6ZMJ2 495 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 PAQR9Q6ZVX9 377 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 SIX5Q8N196 739 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 MLKLQ8NB16 471 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 PRRX2Q99811 253 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 TRMT61BQ9BVS5 477 aaKnown RBP16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 TTLL2Q9BWV7 592 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 SLC46A2Q9BY10 475 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 DNAI2Q9GZS0 605 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 MFSD1Q9H3U5 465 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 MMRN2Q9H8L6 949 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 RWDD2AQ9UIY3 292 aa16.46■□□□□ 0.23
SRGAP2C-205ENST00000617209 MYH10P35580 1976 aa16.46■□□□□ 0.22
SRGAP2C-205ENST00000617209 ATP8B3O60423 1300 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 LRRN2O75325 713 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 FGFR1OPO95684 399 aaKnown RBP16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 ANXA13P27216 316 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 VIPR2P41587 438 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 PPP3CCP48454 512 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 PRKCQQ04759 706 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 FCHO2Q0JRZ9 810 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 SLC44A4Q53GD3 710 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 DCAF17Q5H9S7 520 aaPredicted RBP16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 ASTLQ6HA08 431 aaPredicted RBP16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 DENND5BQ6ZUT9 1274 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 ACOT1Q86TX2 421 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 MON1AQ86VX9 555 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 CMTM8Q8IZV2 173 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 FUKQ8N0W3 1084 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 MRPS31Q92665 395 aaKnown RBP16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 DNASE1L2Q92874 299 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 IRF7Q92985 503 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 SHDQ96IW2 340 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 NT5C1AQ9BXI3 368 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 ARHGEF3Q9NR81 526 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 MAGED2Q9UNF1 606 aaPredicted RBP16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 CTNND2Q9UQB3 1225 aa16.45■□□□□ 0.22
SRGAP2C-205ENST00000617209 HEPACAM2A8MVW5 462 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 F8VP50 259 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 P4HA2O15460 535 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CILPO75339 1184 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 PFKLP17858 780 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 AOC1P19801 751 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 FMO5P49326 533 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 MLLT6P55198 1093 aaPredicted RBP16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CYP4F8P98187 520 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CCDC40Q4G0X9 1142 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 TRIM59Q8IWR1 403 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 WHAMMQ8TF30 809 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 DDX23Q9BUQ8 820 aaKnown RBP16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 SRRTQ9BXP5 876 aaKnown RBP16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 NUP62CLQ9H1M0 184 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CSNK1G1Q9HCP0 422 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 TMEM30AQ9NV96 361 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CA14Q9ULX7 337 aa16.44■□□□□ 0.22
SRGAP2C-205ENST00000617209 CLDN5O00501 218 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 CHADO15335 359 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 CACNA2D1P54289 1103 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 STX17P56962 302 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 CWF19L1Q69YN2 538 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 TXNDC8Q6A555 127 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 FAM35AQ86V20 835 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 NUP93Q8N1F7 819 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 CELF5Q8N6W0 485 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 RSPRY1Q96DX4 576 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 SMARCD1Q96GM5 515 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 MED15Q96RN5 788 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 HNRNPABQ99729 332 aaKnown RBP16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 BRD9Q9H8M2 597 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 DMAP1Q9NPF5 467 aaPredicted RBP16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 CISHQ9NSE2 258 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 COMMD8Q9NX08 183 aa16.43■□□□□ 0.22
SRGAP2C-205ENST00000617209 IL37Q9NZH6 218 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms