RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 USP17L7P0C7H9 530 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 P4HA1P13674 534 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 BDNFP23560 247 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 FOXK2Q01167 660 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 CYP27A1Q02318 531 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 FAM160A1Q05DH4 1040 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 RUNX3Q13761 415 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 PDGFRLQ15198 375 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 KMT5BQ4FZB7 885 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 SDHAF4Q5VUM1 108 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 DENND5BQ6ZUT9 1274 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 GRAMD1CQ8IYS0 662 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 OR6B3Q8NGW1 331 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 PARD3BQ8TEW8 1205 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 ZNF516Q92618 1163 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 PCED1BQ96HM7 432 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 ZFYVE19Q96K21 471 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 C8orf48Q96LL4 319 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 HINFPQ9BQA5 517 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 CRTAC1Q9NQ79 661 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 HPSEQ9Y251 543 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 FRMD4BQ9Y2L6 1034 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 F5P12259 2224 aa10.33□□□□□ -0.76
TARDBP-218ENST00000617172 A0A1W2PQ27 194 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 A0A1W2PQ64 194 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 A0A1W2PQD8 194 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 A8MXQ7 604 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 MAPK13O15264 365 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 CALUO43852 315 aaPredicted RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 ATG13O75143 517 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 PAPSS2O95340 614 aaPredicted RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 CKMP06732 381 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 PTPN1P18031 435 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 HDCP19113 662 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 CNR2P34972 360 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 SOX9P48436 509 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 MYL6P60660 151 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 PSMC1P62191 440 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 NOP14P78316 857 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TNK2Q07912 1038 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 GRSF1Q12849 480 aaKnown RBP eCLIP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 NR1H3Q13133 447 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 BIRC3Q13489 604 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 KCNB1Q14721 858 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 SGSM1Q2NKQ1 1148 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 ZNF667Q5HYK9 610 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 KIAA1958Q8N8K9 716 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 KIAA0895Q8NCT3 520 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TMC2Q8TDI7 906 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TAF4BQ92750 862 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 MYLPFQ96A32 169 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TNIP3Q96KP6 325 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 MRPL45Q9BRJ2 306 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TTLL2Q9BWV7 592 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 ELOVL4Q9GZR5 314 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 SMG9Q9H0W8 520 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 XYLT2Q9H1B5 865 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 EPC1Q9H2F5 836 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 KCTD10Q9H3F6 313 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TRPM5Q9NZQ8 1165 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 NXF1Q9UBU9 619 aaKnown RBP10.32□□□□□ -0.76
TARDBP-218ENST00000617172 TRAF3IP3Q9Y228 551 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 CCL26Q9Y258 94 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 GTF3C3Q9Y5Q9 886 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 DMDP11532 3685 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 ANK1P16157 1881 aa10.32□□□□□ -0.76
TARDBP-218ENST00000617172 CACNA1IQ9P0X4 2223 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 FAM186AA6NE01 2351 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TRDMT1O14717 391 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 HCRTO43612 131 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 RHOBTB3O94955 611 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 C4BPAP04003 597 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 NR3C1P04150 777 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TCF3P15923 654 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TRIM21P19474 475 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 RPL13P26373 211 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 HOXA6P31267 233 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 NDUFA8P51970 172 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 NCOA4Q13772 614 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 CCINQ13939 588 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 MTF1Q14872 753 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 PON2Q15165 354 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 ZNF699Q32M78 642 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 MDH1BQ5I0G3 518 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TDRD10Q5VZ19 366 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TXNDC11Q6PKC3 985 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TSSK4Q6SA08 328 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 CPA6Q8N4T0 437 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 B3GALNT2Q8NCR0 500 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 CCDC26Q8TAB7 109 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TTC8Q8TAM2 541 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 OSCP1Q8WVF1 389 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 SLITRK1Q96PX8 696 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 CYP2S1Q96SQ9 504 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 GZF1Q9H116 711 aaPredicted RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 EBF3Q9H4W6 596 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 TRPC7Q9HCX4 862 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 DUS2Q9NX74 493 aaKnown RBP10.31□□□□□ -0.76
TARDBP-218ENST00000617172 GCNT4Q9P109 453 aa10.31□□□□□ -0.76
TARDBP-218ENST00000617172 NCDNQ9UBB6 729 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms