RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 HGSNATQ68CP4 663 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DPY19L2P1Q6NXN4 242 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 ZC3H14Q6PJT7 736 aaKnown RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DGLUCYQ7Z3D6 616 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 C1orf210Q8IVY1 113 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 GPR65Q8IYL9 337 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 MAML2Q8IZL2 1156 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 SLC35F6Q8N357 371 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DCLK2Q8N568 766 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 MNS1Q8NEH6 495 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 PLEKHO2Q8TD55 490 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 PARD3BQ8TEW8 1205 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 ATRIPQ8WXE1 791 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 FGF13Q92913 245 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 SECISBP2LQ93073 1101 aaKnown RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 DDX27Q96GQ7 796 aaKnown RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 NT5C1BQ96P26 610 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 PPP1R10Q96QC0 940 aaKnown RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 WDR24Q96S15 920 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 NAPGQ99747 312 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 HINFPQ9BQA5 517 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 TCHPQ9BT92 498 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CDT1Q9H211 546 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 RBAKQ9NYW8 714 aaPredicted RBP11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CDH7Q9ULB5 785 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 CDY1Q9Y6F8 540 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 STYXL1Q9Y6J8 313 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 MIA3Q5JRA6 1907 aa11.47□□□□□ -0.57
COL4A1-205ENST00000615732 F8VZ95 297 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 CLDN3O15551 220 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 TACC1O75410 805 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 SLU7O95391 586 aaKnown RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 LCA5LO95447 670 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 HNRNPA1P09651 372 aaKnown RBP eCLIP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 TNNI1P19237 187 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 FGFR3P22607 806 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 PRKCIP41743 596 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 GPC5P78333 572 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 SOX4Q06945 474 aaPredicted RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 SLC18A3Q16572 532 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 ZNF568Q3ZCX4 644 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 PABPC1LQ4VXU2 614 aaKnown RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 C1orf220Q5T0J3 134 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 CD300LGQ6UXG3 332 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 NPAS3Q8IXF0 933 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 TMEM130Q8N3G9 435 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 ALS2CR12Q96Q35 445 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 UBE2TQ9NPD8 197 aaPredicted RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 TOPORSQ9NS56 1045 aaPredicted RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 TRIM10Q9UDY6 481 aa11.46□□□□□ -0.57
COL4A1-205ENST00000615732 AJAP1Q9UKB5 411 aaPredicted RBP11.46□□□□□ -0.57
COL4A1-205ENST00000615732 DOCK6Q96HP0 2047 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 NCOR2Q9Y618 2525 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 VWA8A3KMH1 1905 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 CEP250Q9BV73 2442 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 A0A0B4J269 797 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 MACROD2A1Z1Q3 448 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 DYNC1I1O14576 645 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 XYLBO75191 536 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 TOM1L1O75674 476 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 PIK3CAP42336 1068 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 ACOT2P49753 483 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 MFAP3P55082 362 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 NAP1L1P55209 391 aaKnown RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 STARD6P59095 220 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 BIRC3Q13489 604 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 TUBB2AQ13885 445 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 SURF1Q15526 300 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 SLC5A9Q2M3M2 681 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 ASTE1Q2TB18 679 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 WDR44Q5JSH3 913 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 C10orf76Q5T2E6 689 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 MPZL3Q6UWV2 235 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 ARHGEF19Q8IW93 802 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 SUMF1Q8NBK3 374 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 FBXL13Q8NEE6 735 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 RUBCNQ92622 972 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 ZBTB45Q96K62 511 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 FAM81BQ96LP2 452 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 CGRRF1Q99675 332 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 ACO2Q99798 780 aaKnown RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 TUBB2BQ9BVA1 445 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 L2HGDHQ9H9P8 463 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 DNMT3BQ9UBC3 853 aaKnown RBP11.45□□□□□ -0.58
COL4A1-205ENST00000615732 MTRRQ9UBK8 725 aa11.45□□□□□ -0.58
COL4A1-205ENST00000615732 SMIM28A0A1B0GU29 152 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 TMEM189-UBE2V1I3L0A0 370 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 PODXLO00592 558 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ZNF263O14978 683 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 OGTO15294 1046 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 PHACTR2O75167 634 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 CEBPBP17676 345 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 TNFAIP3P21580 790 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 CD72P21854 359 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 HOXA9P31269 272 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 USP8P40818 1118 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ARPP19P56211 112 aa11.44□□□□□ -0.58
COL4A1-205ENST00000615732 MCCD1P59942 119 aaPredicted RBP11.44□□□□□ -0.58
COL4A1-205ENST00000615732 ROR1Q01973 937 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms