RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 DNPEPQ9ULA0 475 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 TIAM2Q8IVF5 1701 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 MAP2K7O14733 419 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 ADCY3O60266 1144 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 ZFXP17010 805 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 CHKAP35790 457 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 RAB44Q7Z6P3 723 aaPredicted RBP9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 RXFP2Q8WXD0 754 aa9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 SARS2Q9NP81 518 aaKnown RBP9.33□□□□□ -0.92
PDLIM5-222ENST00000615540 VDRP11473 427 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 OR1G1P47890 313 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 PTPN11Q06124 597 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 GSDMBQ8TAX9 411 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 RAET1EQ8TD07 263 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ALKBH8Q96BT7 664 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 SUDS3Q9H7L9 328 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 CYP4F11Q9HBI6 524 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TRPC7Q9HCX4 862 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 UMODL1Q5DID0 1318 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 SPECC1L-ADORA2AF8WAN1 911 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 H3BRB1 525 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 NEMP1O14524 444 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 S100BP04271 92 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 JAM2P57087 298 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 LONP2Q86WA8 852 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.32□□□□□ -0.925e-7■■■■■ 62.3
PDLIM5-222ENST00000615540 KREMEN1Q96MU8 473 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TUT1Q9H6E5 874 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 KLC4Q9NSK0 619 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 SYNPO2Q9UMS6 1093 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 NHSL1Q5SYE7 1610 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 RASSF10A6NK89 507 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 DNAJC3Q13217 504 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 MYBPC2Q14324 1141 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TTC39BQ5VTQ0 682 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 FAM117BQ6P1L5 589 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ADAM32Q8TC27 787 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TFB1MQ8WVM0 346 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 CNTNAP1P78357 1384 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 GPC4O75487 556 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TYK2P29597 1187 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 EPHB1P54762 984 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TAF1BQ53T94 588 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 SIAH1Q8IUQ4 282 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TTC39CQ8N584 583 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 NETO2Q8NC67 525 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ERLEC1Q96DZ1 483 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 NCAPGQ9BPX3 1015 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TSSK1BQ9BXA7 367 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 HACD3Q9P035 362 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 PCDHA2Q9Y5H9 948 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 MYH6P13533 1939 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 TADA2AO75478 443 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 PAMP19021 973 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 PRKCIP41743 596 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 KDSRQ06136 332 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 MFSD10Q14728 455 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 FAM71AQ8IYT1 594 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ATPAF2Q8N5M1 289 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 KLRG1Q96E93 195 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ELMO2Q96JJ3 720 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 ACO2Q99798 780 aaKnown RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 SHCBP1LQ9BZQ2 653 aa9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 GBA2Q9HCG7 927 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 USP15Q9Y4E8 981 aaPredicted RBP9.32□□□□□ -0.92
PDLIM5-222ENST00000615540 CCDC88AQ3V6T2 1871 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 RRN3P2A6NIE6 340 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 DDX3YO15523 660 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 FARP2O94887 1054 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 POMCP01189 267 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 MARSP56192 900 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 TRIM67Q6ZTA4 783 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 FAM131BQ86XD5 332 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 MYCBPAPQ8TBZ2 947 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 GAS2O43903 313 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 USP2O75604 605 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 AP1G2O75843 785 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 PIAS1O75925 651 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 TARSP26639 723 aaKnown RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 GCNT1Q02742 428 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 C15orf59Q2T9L4 293 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 KIF19Q2TAC6 998 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 ZCWPW2Q504Y3 356 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 BRSK2Q8IWQ3 736 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 IPMKQ8NFU5 416 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 N4BP2L2Q92802 583 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 ABI2Q9NYB9 513 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 MX2P20592 715 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 RGS9BPQ6ZS82 235 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 BBS5Q8N3I7 341 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 ATP6V1E2Q96A05 226 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 RMDN2Q96LZ7 410 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 FAM111AQ96PZ2 611 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 C20orf96Q9NUD7 363 aaPredicted RBP9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 NINJ2Q9NZG7 142 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 BTBD7Q9P203 1132 aa9.31□□□□□ -0.92
PDLIM5-222ENST00000615540 ZFATQ9P243 1243 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms