RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 MFSD14AQ96MC6 490 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 VCX3BQ9H321 246 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 CHKBQ9Y259 395 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 STAMBPO95630 424 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 GLRA2P23416 452 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 SDC4P31431 198 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 RASA2Q15283 850 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 MAGEC3Q8TD91 643 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 GPRASP2Q96D09 838 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 MTBPQ96DY7 904 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 WWP1Q9H0M0 922 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 CYP39A1Q9NYL5 469 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 POLIQ9UNA4 740 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 FIS1Q9Y3D6 152 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 MTA2O94776 668 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 SNRPAP09012 282 aaKnown RBP13.11□□□□□ -0.31
MSH6-213ENST00000614496 TNFSF9P41273 254 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 STX3Q13277 289 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 KBTBD12Q3ZCT8 623 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 C1orf220Q5T0J3 134 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 NPNTQ6UXI9 565 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 ALLCQ8N6M5 410 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 RFWD2Q8NHY2 731 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 ASAP3Q8TDY4 903 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 TEX13BQ9BXU2 312 aa13.11□□□□□ -0.31
MSH6-213ENST00000614496 FCHO1O14526 889 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 RPL22P35268 128 aaKnown RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 MRPS35P82673 323 aaKnown RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 BIRC2Q13490 618 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 RAPH1Q70E73 1250 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 RSPH3Q86UC2 560 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 OR6B3Q8NGW1 331 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 CD101Q93033 1021 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 SLC38A10Q9HBR0 1119 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 PIH1D1Q9NWS0 290 aaKnown RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 ADGRA3Q8IWK6 1321 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 ZNF862O60290 1169 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 KRT36O76013 467 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 MYCNP04198 464 aaPredicted RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 SLC30A9Q6PML9 568 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 ZCCHC23Q6ZST2 131 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 ZNF354CQ86Y25 554 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 TEX9Q8N6V9 391 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 RNF34Q969K3 372 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 DNAI2Q9GZS0 605 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 KAT6AQ92794 2004 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 NAV1Q8NEY1 1877 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 FAM237BA0A1B0GVD1 139 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 SUPT20HL2P0C7V6 817 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 FDX1P10109 184 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 SERPINB4P48594 390 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 AP2B1P63010 937 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 SUPT20HL1Q3ZLR7 823 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 SPDYE1Q8NFV5 336 aaPredicted RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 ZNRF3Q9ULT6 936 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 CCDC78A2IDD5 438 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 AVILO75366 819 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 HIRAP54198 1017 aaPredicted RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 ATXN3P54252 364 aaPredicted RBP13.1□□□□□ -0.31
MSH6-213ENST00000614496 NRLP54845 237 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 AQP5P55064 265 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 RABGAP1LQ5R372 815 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 TXNRD3NBQ6F5E7 133 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 DENND1BQ6P3S1 775 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 ACTL7BQ9Y614 415 aa13.1□□□□□ -0.31
MSH6-213ENST00000614496 ATP8B3O60423 1300 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 APOL1O14791 398 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 UNGP13051 313 aaPredicted RBP13.09□□□□□ -0.31
MSH6-213ENST00000614496 ANKRD22Q5VYY1 191 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 STYK1Q6J9G0 422 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 MON1BQ7L1V2 547 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 PAF1Q8N7H5 531 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 NLRP7Q8WX94 980 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 VCPIP1Q96JH7 1222 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 FGD4Q96M96 766 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 ARHGEF3Q9NR81 526 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 RIPK3Q9Y572 518 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 MYPNQ86TC9 1320 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.09□□□□□ -0.31
MSH6-213ENST00000614496 ITGB3P05106 788 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 ARL4AP40617 200 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 NAMPTP43490 491 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 HSD17B4P51659 736 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 MMRN1Q13201 1228 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 SPDYE2Q495Y8 402 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 RASSF3Q86WH2 238 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 BTBD10Q9BSF8 475 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 MRIQ9BWK5 157 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 CCDC134Q9H6E4 229 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 RSAD1Q9HA92 442 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 MYOZ2Q9NPC6 264 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 PAPPAQ13219 1627 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
MSH6-213ENST00000614496 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
MSH6-213ENST00000614496 TRPA1O75762 1119 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms