RNA–Protein interactions for RNA: ENST00000613508.4

CBWD1-222, Transcript of COBW domain containing 1, human

TSL 5 BASIC

Gene CBWD1, Length 1,143 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD1-222	ENST00000613508	SEMA4G	Q9NTN9	838 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	HSPBP1	Q9NZL4	362 aa		11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	MAGED2	Q9UNF1	606 aa	Predicted RBP	11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	R3HCC1	Q9Y3T6	440 aa	Known RBP	11.92	□□□□□ -0.5
CBWD1-222	ENST00000613508	UBE4B	O95155	1302 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	SPTBN2	O15020	2390 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	SLC30A4	O14863	429 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	TGFB1I1	O43294	461 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	HCRT	O43612	131 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	CUTA	O60888	179 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	ATP2C2	O75185	946 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	TACC1	O75410	805 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	CKM	P06732	381 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	PDIA4	P13667	645 aa	Known RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	LMO2	P25791	158 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	GJA4	P35212	333 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	PDE6C	P51160	858 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	SRSF5	Q13243	272 aa	Known RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	MTF1	Q14872	753 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	SNRNP35	Q16560	246 aa	Known RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	LPAL2	Q16609	132 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	FAM26F	Q5R3K3	315 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	HEATR6	Q6AI08	1181 aa	Known RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	PKN3	Q6P5Z2	889 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	TRAPPC11	Q7Z392	1133 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	CAMKK1	Q8N5S9	505 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	FAM160A2	Q8N612	972 aa	Predicted RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	STKLD1	Q8NE28	680 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	MYCBPAP	Q8TBZ2	947 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	GAB3	Q8WWW8	586 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	ATP2A3	Q93084	1043 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	HPS3	Q969F9	1004 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	ZNF396	Q96N95	335 aa	Predicted RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	CYP2S1	Q96SQ9	504 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	SYT15	Q9BQS2	421 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	TTLL2	Q9BWV7	592 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	BACH2	Q9BYV9	841 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	CRTAC1	Q9NQ79	661 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	AGPAT3	Q9NRZ7	376 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	EHD2	Q9NZN4	543 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	ARHGAP26	Q9UNA1	814 aa		11.91	□□□□□ -0.5
CBWD1-222	ENST00000613508	ACACB	O00763	2458 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	STAU1	O95793	577 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	EGF	P01133	1207 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	RAP1GAP	P47736	663 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	PPP3CC	P48454	512 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	GALK1	P51570	392 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	NOP14	P78316	857 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	PSMD6	Q15008	389 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	BMT2	Q1RMZ1	405 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	EML3	Q32P44	896 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	LMBRD2	Q68DH5	695 aa	Predicted RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	SHC4	Q6S5L8	630 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	PRR23C	Q6ZRP0	262 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	SCN4B	Q8IWT1	228 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	C12orf56	Q8IXR9	622 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	NOC3L	Q8WTT2	800 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	TMEM174	Q8WUU8	243 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	SCFD1	Q8WVM8	642 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	MYLPF	Q96A32	169 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	ZC3H10	Q96K80	434 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	C8orf48	Q96LL4	319 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	P2RY13	Q9BPV8	354 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	ECT2	Q9H8V3	914 aa		11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	DUS2	Q9NX74	493 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	CGN	Q9P2M7	1197 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	MAGEC2	Q9UBF1	373 aa	Predicted RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	11.9	□□□□□ -0.5
CBWD1-222	ENST00000613508	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	C2orf78	A6NCI8	922 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	RNF40	O75150	1001 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	RPP40	O75818	363 aa	Known RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	HDC	P19113	662 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	BDNF	P23560	247 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	HOXC13	P31276	330 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	LIMK1	P53667	647 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	PSMC1	P62191	440 aa	Known RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	ASIC1	P78348	528 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	CYP24A1	Q07973	514 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	KCNB1	Q14721	858 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	DENND5B	Q6ZUT9	1274 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	CEP68	Q76N32	757 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	SYT13	Q7L8C5	426 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	CACNA2D4	Q7Z3S7	1137 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	ARL14EP	Q8N8R7	260 aa	Predicted RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	XXYLT1	Q8NBI6	393 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	CCDC26	Q8TAB7	109 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	SH3RF2	Q8TEC5	729 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	EZH1	Q92800	747 aa	Predicted RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	SNX21	Q969T3	373 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	PCED1B	Q96HM7	432 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	CGRRF1	Q99675	332 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	GZF1	Q9H116	711 aa	Predicted RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	TRPC7	Q9HCX4	862 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	TFIP11	Q9UBB9	837 aa	Known RBP	11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	EBF1	Q9UH73	591 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	SLC8A2	Q9UPR5	921 aa		11.89	□□□□□ -0.51
CBWD1-222	ENST00000613508	GREB1	Q4ZG55	1949 aa		11.88	□□□□□ -0.51

Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms