RNA–Protein interactions for RNA: ENST00000613455.4

CPNE9-205, Transcript of copine family member 9, humanhuman

TSL 5 BASIC

Gene CPNE9, Length 1,742 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-205ENST00000613455 KRT82Q9NSB4 513 aa21.4■■□□□ 1.02
CPNE9-205ENST00000613455 SLC4A7Q9Y6M7 1214 aa21.4■■□□□ 1.02
CPNE9-205ENST00000613455 GABBR2O75899 941 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 NPR3P17342 541 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 CASQ1P31415 396 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 RGS7P49802 495 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 RASIP1Q5U651 963 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 XYLT1Q86Y38 959 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 HERC6Q8IVU3 1022 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 MSANTD4Q8NCY6 345 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 STK32AQ8WU08 396 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 C18orf8Q96DM3 657 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 MED10Q9BTT4 135 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 ZCWPW1Q9H0M4 648 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 TMEM30AQ9NV96 361 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 STRIP2Q9ULQ0 834 aa21.39■■□□□ 1.01
CPNE9-205ENST00000613455 E5RJQ4 531 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 BUB1BO60566 1050 aaPredicted RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 BEST1O76090 585 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 PLA2G4AP47712 749 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 RPL34P49207 117 aaKnown RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 ZNF280DQ6N043 979 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 CLEC20AQ6ZU45 233 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 SLFN11Q7Z7L1 901 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 C3orf20Q8ND61 904 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 TTPALQ9BTX7 342 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 TRIM7Q9C029 511 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 ST7Q9NRC1 585 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 INSL6Q9Y581 213 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 XPO1O14980 1071 aaKnown RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 TBC1D4O60343 1298 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 GJB6O95452 261 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 OR4Q2P0C623 313 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 FAM200BP0CF97 657 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 ATP2A2P16615 1042 aaKnown RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 CACNA2D1P54289 1103 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 MAPRE1Q15691 268 aaKnown RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 CTXN3Q4LDR2 81 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 PHOSPHO2Q8TCD6 241 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 BTBD6Q96KE9 485 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 NAPGQ99747 312 aaPredicted RBP21.38■■□□□ 1.01
CPNE9-205ENST00000613455 RHOBTB2Q9BYZ6 727 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 SYNCQ9H7C4 482 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 PARVAQ9NVD7 372 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 SCINQ9Y6U3 715 aa21.38■■□□□ 1.01
CPNE9-205ENST00000613455 CTAGE9A4FU28 777 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 PIK3R2O00459 728 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 ENC1O14682 589 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 PPP1R15BQ5SWA1 713 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 TMEM110Q86TL2 294 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 SP7Q8TDD2 431 aaPredicted RBP21.37■■□□□ 1.01
CPNE9-205ENST00000613455 IPO4Q8TEX9 1081 aaKnown RBP21.37■■□□□ 1.01
CPNE9-205ENST00000613455 SMARCD1Q96GM5 515 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 CALR3Q96L12 384 aaKnown RBP21.37■■□□□ 1.01
CPNE9-205ENST00000613455 SMOQ99835 787 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 ZBED2Q9BTP6 218 aa21.37■■□□□ 1.01
CPNE9-205ENST00000613455 PATJQ8NI35 1801 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 OR6C75A6NL08 312 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 CAPN15O75808 1086 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 AP1G2O75843 785 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 FTCDO95954 541 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 ATP1A1P05023 1023 aaKnown RBP21.36■■□□□ 1.01
CPNE9-205ENST00000613455 ZNF268Q14587 947 aaPredicted RBP21.36■■□□□ 1.01
CPNE9-205ENST00000613455 USP41Q3LFD5 358 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 DNAJC24Q6P3W2 148 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 DAAM2Q86T65 1068 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 PIGZQ86VD9 579 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 FIBCD1Q8N539 461 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 ZMIZ2Q8NF64 920 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 CLP1Q92989 425 aaKnown RBP21.36■■□□□ 1.01
CPNE9-205ENST00000613455 MCRS1Q96EZ8 462 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 RAD9AQ99638 391 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 MRPL47Q9HD33 250 aaKnown RBP21.36■■□□□ 1.01
CPNE9-205ENST00000613455 ABCB6Q9NP58 842 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 CHST7Q9NS84 486 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 SPG21Q9NZD8 308 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 WDR35Q9P2L0 1181 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 ANAPC7Q9UJX3 599 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 JRKLQ9Y4A0 524 aa21.36■■□□□ 1.01
CPNE9-205ENST00000613455 CARNS1A5YM72 827 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 SLC39A12Q504Y0 691 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 C11orf63Q6NUN7 778 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 PRSS55Q6UWB4 352 aaPredicted RBP21.35■■□□□ 1.01
CPNE9-205ENST00000613455 RSPO2Q6UXX9 243 aaPredicted RBP21.35■■□□□ 1.01
CPNE9-205ENST00000613455 FAM183BPQ6ZVS7 135 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 ANKS3Q6ZW76 656 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 TMEM169Q96HH4 297 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 PIWIL1Q96J94 861 aaKnown RBP21.35■■□□□ 1.01
CPNE9-205ENST00000613455 HSFY1Q96LI6 401 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 MTIF3Q9H2K0 278 aaKnown RBP21.35■■□□□ 1.01
CPNE9-205ENST00000613455 CSNK1G1Q9HCP0 422 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 CYLDQ9NQC7 956 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 LCHNA4D1U4 455 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 GOLGA8SH3BPF8 625 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 SOD2P04179 222 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 BDNFP23560 247 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 MAGEA10P43363 369 aaPredicted RBP21.35■■□□□ 1.01
CPNE9-205ENST00000613455 MAP3K7CLP57077 242 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 SLC8A3P57103 927 aa21.35■■□□□ 1.01
CPNE9-205ENST00000613455 RPL7AP62424 266 aaKnown RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms