RNA–Protein interactions for RNA: ENST00000612839.1

CCL3L3-201, Transcript of C-C motif chemokine ligand 3 like 3, humanhuman

TSL 1 (best)

Gene CCL3L3, Length 1,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L3-201ENST00000612839 HSD3B7Q9H2F3 369 aa12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 TMEM30AQ9NV96 361 aa12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 GCNT4Q9P109 453 aa12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 ASB3Q9Y575 518 aa12.05□□□□□ -0.48
CCL3L3-201ENST00000612839 OBSL1O75147 1896 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 MOSPD3O75425 235 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 PRKCSHP14314 528 aaPredicted RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 TBXAS1P24557 533 aaPredicted RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 EEF1GP26641 437 aaKnown RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 CACNA2D1P54289 1103 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF394Q53GI3 561 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 CYP4A22Q5TCH4 519 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 PHLDB3Q6NSJ2 640 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 VSTM1Q6UX27 236 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 PDZD4Q76G19 769 aaPredicted RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ITIH5Q86UX2 942 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ARHGEF19Q8IW93 802 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ZDHHC14Q8IZN3 488 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 FUKQ8N0W3 1084 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 PPM1KQ8N3J5 372 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 UBR7Q8N806 425 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 FAM200AQ8TCP9 573 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 FGF13Q92913 245 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ACSF2Q96CM8 615 aaPredicted RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 TCEAL4Q96EI5 215 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 CRACR2AQ9BSW2 395 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 NT5C1AQ9BXI3 368 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF518BQ9C0D4 1074 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 INTS2Q9H0H0 1204 aaKnown RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 NDST4Q9H3R1 872 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF334Q9HCZ1 680 aaPredicted RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 ASAH2Q9NR71 780 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 MRPS23Q9Y3D9 190 aaKnown RBP12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 MYH10P35580 1976 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 MYO10Q9HD67 2058 aa12.04□□□□□ -0.48
CCL3L3-201ENST00000612839 DENND4CQ5VZ89 1909 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GTPBP10A4D1E9 387 aaKnown RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 MYL4P12829 197 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 LAMP2P13473 410 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 CCDC130P13994 396 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 HMGA1P17096 107 aaKnown RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 SLC9A1P19634 815 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GBP2P32456 591 aaPredicted RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GRIK1P39086 918 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 RAD23BP54727 409 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 RPL10AP62906 217 aaKnown RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GCNT1Q02742 428 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 MTMR3Q13615 1198 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 VEPH1Q14D04 833 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 ZSCAN23Q3MJ62 389 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 TRIM65Q6PJ69 517 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GBP6Q6ZN66 633 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 GAREM2Q75VX8 874 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 FAM35AQ86V20 835 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 RNF135Q8IUD6 432 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 SCN4BQ8IWT1 228 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 NPAS3Q8IXF0 933 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 TTC39CQ8N584 583 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 AOPEPQ8N6M6 819 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 LEMD2Q8NC56 503 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 ING5Q8WYH8 240 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 KAT5Q92993 513 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 BPIFA3Q9BQP9 254 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 NAT10Q9H0A0 1025 aaKnown RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 IL21Q9HBE4 155 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 FAM49BQ9NUQ9 324 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 EPS15L1Q9UBC2 864 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 CDH7Q9ULB5 785 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF638Q14966 1978 aaKnown RBP12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 NCOR1O75376 2440 aa12.03□□□□□ -0.48
CCL3L3-201ENST00000612839 F8VP50 259 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF197O14709 1029 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 MICAL2O94851 1124 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 ZNF18P17022 549 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 GJA1P17302 382 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 CEBPBP17676 345 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 ACO1P21399 889 aaKnown RBP12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 PON1P27169 355 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 APBA1Q02410 837 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 KRT31Q15323 416 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 EXOC3L4Q17RC7 722 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 DHX40Q8IX18 779 aaKnown RBP12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 SLC4A11Q8NBS3 891 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 SHKBP1Q8TBC3 707 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 SLC2A14Q8TDB8 520 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 CYFIP2Q96F07 1278 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 TMEM176AQ96HP8 235 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 SPATA17Q96L03 361 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 KREMEN1Q96MU8 473 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 KCNK16Q96T55 309 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 ANP32EQ9BTT0 268 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 TAB2Q9NYJ8 693 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 LIMD1Q9UGP4 676 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 TTC28Q96AY4 2481 aa12.02□□□□□ -0.48
CCL3L3-201ENST00000612839 PATJQ8NI35 1801 aa12.02□□□□□ -0.49
CCL3L3-201ENST00000612839 A0A1W2PRU2 124 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms