RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 CC2D1AQ6P1N0 951 aaPredicted RBP18.54■□□□□ 0.56
PRKN-209ENST00000612485 TSSK4Q6SA08 328 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 SLC9A9Q8IVB4 645 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 ZBTB44Q8NCP5 570 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 TMEM174Q8WUU8 243 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 NELL1Q92832 810 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 CCDC47Q96A33 483 aaKnown RBP18.54■□□□□ 0.56
PRKN-209ENST00000612485 HINFPQ9BQA5 517 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 SCAND2PQ9GZW5 306 aaPredicted RBP18.54■□□□□ 0.56
PRKN-209ENST00000612485 GZF1Q9H116 711 aaPredicted RBP18.54■□□□□ 0.56
PRKN-209ENST00000612485 GKN1Q9NS71 199 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 EHD2Q9NZN4 543 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 CCL26Q9Y258 94 aa18.54■□□□□ 0.56
PRKN-209ENST00000612485 TRAV19A0A0A6YYK7 116 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 FAM237AA0A1B0GTK4 181 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 PDXKO00764 312 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 TRIM66O15016 1216 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 KIF20AO95235 890 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 CASP4P49662 377 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 MYL6P60660 151 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 BIRC3Q13489 604 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 MDH1BQ5I0G3 518 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 TXNDC11Q6PKC3 985 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 PARD3BQ8TEW8 1205 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 RUBCNQ92622 972 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 PCED1BQ96HM7 432 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 FAM83CQ9BQN1 747 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 VRTNQ9H8Y1 702 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 TRPC7Q9HCX4 862 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 DMAC2Q9NW81 257 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 NXF1Q9UBU9 619 aaKnown RBP18.53■□□□□ 0.56
PRKN-209ENST00000612485 DENND4CQ5VZ89 1909 aa18.53■□□□□ 0.56
PRKN-209ENST00000612485 LILRB5O75023 590 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 CLSTN1O94985 981 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 RPN1P04843 607 aaKnown RBP18.52■□□□□ 0.56
PRKN-209ENST00000612485 CKMP06732 381 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 USP17L7P0C7H9 530 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 CXCL12P48061 93 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 PDE6CP51160 858 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 NDUFA8P51970 172 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 CLDN10P78369 228 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 AMPD2Q01433 879 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 FAM160A1Q05DH4 1040 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 RUNX3Q13761 415 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 PON2Q15165 354 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 DENND5BQ6ZUT9 1274 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 SYNPOQ8N3V7 929 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 SPEM1Q8N4L4 309 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 SUMF1Q8NBK3 374 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 XYLT2Q9H1B5 865 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 KCTD10Q9H3F6 313 aa18.52■□□□□ 0.56
PRKN-209ENST00000612485 LRRIQ3A6PVS8 624 aaPredicted RBP18.51■□□□□ 0.55
PRKN-209ENST00000612485 A8MXQ7 604 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 CALUO43852 315 aaPredicted RBP18.51■□□□□ 0.55
PRKN-209ENST00000612485 NR3C1P04150 777 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 TDGF1P13385 188 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 PTPN1P18031 435 aaKnown RBP18.51■□□□□ 0.55
PRKN-209ENST00000612485 PDGFRLQ15198 375 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 ZNF699Q32M78 642 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 TDRD10Q5VZ19 366 aaKnown RBP18.51■□□□□ 0.55
PRKN-209ENST00000612485 PLEKHO2Q8TD55 490 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 CHAMP1Q96JM3 812 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 C8orf48Q96LL4 319 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 ELOVL4Q9GZR5 314 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 EBF3Q9H4W6 596 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 HPS4Q9NQG7 708 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 RBM12Q9NTZ6 932 aaKnown RBP18.51■□□□□ 0.55
PRKN-209ENST00000612485 OBSL1O75147 1896 aa18.51■□□□□ 0.55
PRKN-209ENST00000612485 GVINP1Q7Z2Y8 2422 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 A0A1W2PQ27 194 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 A0A1W2PQ64 194 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 A0A1W2PQD8 194 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 C4BPAP04003 597 aaKnown RBP18.5■□□□□ 0.55
PRKN-209ENST00000612485 PFKLP17858 780 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 SATB1Q01826 763 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 NCOA4Q13772 614 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 GAS6Q14393 721 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 KCNB1Q14721 858 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 MTF1Q14872 753 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 ZNF667Q5HYK9 610 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 TRIM68Q6AZZ1 485 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 B3GALNT2Q8NCR0 500 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 EPC1Q9H2F5 836 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 DPEP3Q9H4B8 488 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 TRPM5Q9NZQ8 1165 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 FRMD4BQ9Y2L6 1034 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 NME7Q9Y5B8 376 aa18.5■□□□□ 0.55
PRKN-209ENST00000612485 KIF26AQ9ULI4 1882 aaPredicted RBP18.5■□□□□ 0.55
PRKN-209ENST00000612485 ZNF638Q14966 1978 aaKnown RBP18.5■□□□□ 0.55
PRKN-209ENST00000612485 F8VP50 259 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 RHOBTB3O94955 611 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 PAPSS2O95340 614 aaPredicted RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 P4HA1P13674 534 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 HDCP19113 662 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 PPP3CCP48454 512 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 NOP14P78316 857 aaKnown RBP18.49■□□□□ 0.55
PRKN-209ENST00000612485 CCINQ13939 588 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 ZNF77Q15935 545 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 CEP135Q66GS9 1140 aa18.49■□□□□ 0.55
PRKN-209ENST00000612485 KRBA2Q6ZNG9 492 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms