RNA–Protein interactions for RNA: ENST00000611963.4

TARDBP-213, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-213ENST00000611963 LRRC57Q8N9N7 239 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TTC13Q8NBP0 860 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TMEM35BQ8NCS4 154 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 UBA3Q8TBC4 463 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 ZNF564Q8TBZ8 553 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 MYLIPQ8WY64 445 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TIFAQ96CG3 184 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 BTBD6Q96KE9 485 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 UROC1Q96N76 676 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 FAM124BQ9H5Z6 455 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 TJP2Q9UDY2 1190 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 DNAJB4Q9UDY4 337 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 GTF3C4Q9UKN8 822 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PACSIN2Q9UNF0 486 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 COG5Q9UP83 839 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 YBX2Q9Y2T7 364 aaKnown RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 HYOU1Q9Y4L1 999 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CEP83Q9Y592 693 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 PCDHGC5Q9Y5F6 944 aa8.57□□□□□ -1.04
TARDBP-213ENST00000611963 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.57□□□□□ -1.04
TARDBP-213ENST00000611963 CHD9Q3L8U1 2897 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 GBF1Q92538 1859 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TULP2O00295 520 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 CLDN5O00501 218 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 GPR37O15354 613 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 ODC1P11926 461 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 MYOGP15173 224 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 MMP8P22894 467 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TKTP29401 623 aaKnown RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 CDH5P33151 784 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 RGS7P49802 495 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 RABGGTBP53611 331 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 BCAR1P56945 870 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 AMPD2Q01433 879 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 IKBKEQ14164 716 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 IFI16Q16666 785 aaKnown RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 MDH1BQ5I0G3 518 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 LIN9Q5TKA1 542 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 FAM117BQ6P1L5 589 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 DCLRE1AQ6PJP8 1040 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 LCLAT1Q6UWP7 414 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TMCO2Q7Z6W1 182 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TTC30AQ86WT1 665 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 RHOT2Q8IXI1 618 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 CRIPAKQ8N1N5 446 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 CRYBG2Q8N1P7 616 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 B3GALNT2Q8NCR0 500 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 ANKK1Q8NFD2 765 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 RSPH1Q8WYR4 309 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TRIM11Q96F44 468 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 CPXM1Q96SM3 734 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 PSMB7Q99436 277 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 RTP3Q9BQQ7 232 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 SYT15Q9BQS2 421 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TRIM7Q9C029 511 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 LHX5Q9H2C1 402 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 MTIF3Q9H2K0 278 aaKnown RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 ZNF576Q9H609 170 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 NRDE2Q9H7Z3 1164 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 AVENQ9NQS1 362 aaPredicted RBP8.56□□□□□ -1.04
TARDBP-213ENST00000611963 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 TSPAN16Q9UKR8 245 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 KIAA1257Q9ULG3 409 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 SLC4A7Q9Y6M7 1214 aa8.56□□□□□ -1.04
TARDBP-213ENST00000611963 ZNF638Q14966 1978 aaKnown RBP8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PATJQ8NI35 1801 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ZBBXA8MT70 800 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 GOLGA8SH3BPF8 625 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 M0QZQ0 153 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PIK3R2O00459 728 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 GABRDO14764 452 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 HOXA2O43364 376 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 SRGAP2O75044 1071 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 MTA2O94776 668 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ARHGEF15O94989 841 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ERBB2P04626 1255 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 CALB1P05937 261 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 MYBL1P10243 752 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ATP2A2P16615 1042 aaKnown RBP8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PTPN1P18031 435 aaKnown RBP8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PBX3P40426 434 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 GPD2P43304 727 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 LHX1P48742 406 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 SLC11A1P49279 550 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 DEFB103AP81534 67 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PDCLQ13371 301 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 MESDQ14696 234 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 TCEAL1Q15170 157 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 STILQ15468 1287 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 PKDCCQ504Y2 493 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 MEI1Q5TIA1 1274 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ARHGAP17Q68EM7 881 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 SLFN11Q7Z7L1 901 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 DAAM2Q86T65 1068 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 ERICH1Q86X53 443 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 TMEM86AQ8N2M4 240 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 LRRN4CLQ8ND94 238 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 SLC2A14Q8TDB8 520 aa8.55□□□□□ -1.04
TARDBP-213ENST00000611963 SUSD3Q96L08 255 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms