RNA–Protein interactions for RNA: ENST00000611269.4

UBE3C-209, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2 BASIC

Gene UBE3C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-209ENST00000611269 FAM170AA1A519 330 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 LCHNA4D1U4 455 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 LAG3P18627 525 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 RABGGTBP53611 331 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 FAM109BQ6ICB4 259 aaPredicted RBP23.51■■□□□ 1.35
UBE3C-209ENST00000611269 MCOLN2Q8IZK6 566 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 TTC39CQ8N584 583 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 ZNF564Q8TBZ8 553 aaPredicted RBP23.51■■□□□ 1.35
UBE3C-209ENST00000611269 ZNF558Q96NG5 402 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 ELOVL4Q9GZR5 314 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 VIPAS39Q9H9C1 493 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 GDF3Q9NR23 364 aa23.51■■□□□ 1.35
UBE3C-209ENST00000611269 CNOT8Q9UFF9 292 aaKnown RBP23.51■■□□□ 1.35
UBE3C-209ENST00000611269 HCRTO43612 131 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 TRAPPC3O43617 180 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 MYBL2P10244 700 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 WARSP23381 471 aaKnown RBP23.5■■□□□ 1.35
UBE3C-209ENST00000611269 GNL1P36915 607 aaPredicted RBP23.5■■□□□ 1.35
UBE3C-209ENST00000611269 RAD23BP54727 409 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 CENPCQ03188 943 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 SMC1AQ14683 1233 aaKnown RBP23.5■■□□□ 1.35
UBE3C-209ENST00000611269 PPP1R2P3Q6NXS1 205 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 OSTM1Q86WC4 334 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 IFT20Q8IY31 132 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 TMEM86AQ8N2M4 240 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 COLGALT1Q8NBJ5 622 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 SP7Q8TDD2 431 aaPredicted RBP23.5■■□□□ 1.35
UBE3C-209ENST00000611269 AENQ8WTP8 325 aaKnown RBP23.5■■□□□ 1.35
UBE3C-209ENST00000611269 GPR62Q9BZJ7 368 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 SNX25Q9H3E2 840 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 VWA8A3KMH1 1905 aa23.5■■□□□ 1.35
UBE3C-209ENST00000611269 GRXCR1A8MXD5 290 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 LINC00271P0C7V0 271 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 LMO2P25791 158 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 GNA15P30679 374 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 MESDQ14696 234 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 DCAF12L1Q5VU92 463 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 FUT10Q6P4F1 479 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 UBL4BQ8N7F7 174 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 IGSF21Q96ID5 467 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 PCDHB8Q9UN66 801 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 SF3B1O75533 1304 aaKnown RBP eCLIP23.49■■□□□ 1.356e-6■■■■■ 53.6
UBE3C-209ENST00000611269 GBF1Q92538 1859 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 A8MXQ7 604 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 KRIT1O00522 736 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 GABRDO14764 452 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 ATMINO43313 823 aaPredicted RBP23.49■■□□□ 1.35
UBE3C-209ENST00000611269 CYP11A1P05108 521 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 COMTP21964 271 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 TKTP29401 623 aaKnown RBP23.49■■□□□ 1.35
UBE3C-209ENST00000611269 RGS19P49795 217 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 SLC4A11Q8NBS3 891 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 CD101Q93033 1021 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 TMEM176AQ96HP8 235 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 VCPIP1Q96JH7 1222 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 NAP1L3Q99457 506 aaPredicted RBP23.49■■□□□ 1.35
UBE3C-209ENST00000611269 NT5C1AQ9BXI3 368 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 DSEQ9UL01 958 aa23.49■■□□□ 1.35
UBE3C-209ENST00000611269 CAPN15O75808 1086 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 GLI1P08151 1106 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 PDGFRBP09619 1106 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 FAM163BP0C2L3 166 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 MRPS25P82663 173 aaKnown RBP23.48■■□□□ 1.35
UBE3C-209ENST00000611269 FAM171A1Q5VUB5 890 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 UNC93AQ86WB7 457 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 SLC39A11Q8N1S5 342 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 ALG3Q92685 438 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 CYFIP2Q96F07 1278 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 ZSWIM1Q9BR11 485 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 LAMA3Q16787 3333 aa23.48■■□□□ 1.35
UBE3C-209ENST00000611269 ARHGEF37A1IGU5 675 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 MYOGP15173 224 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 TYMPP19971 482 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 NSFP46459 744 aaKnown RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 PEX5P50542 639 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 METTL23Q86XA0 190 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 CPA5Q8WXQ8 436 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 CLP1Q92989 425 aaKnown RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 B3GALT6Q96L58 329 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 DPEP3Q9H4B8 488 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 DDX43Q9NXZ2 648 aaKnown RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 CHORDC1Q9UHD1 332 aaPredicted RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 PDE4DIPQ5VU43 2346 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 HEXIM1O94992 359 aaKnown RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 PAEPP09466 180 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 CTNNA2P26232 953 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 LHX1P48742 406 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 ELAVL2Q12926 359 aaKnown RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 GPS2Q13227 327 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 NAA35Q5VZE5 725 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 ACOT1Q86TX2 421 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 PHF13Q86YI8 300 aaPredicted RBP23.47■■□□□ 1.35
UBE3C-209ENST00000611269 KLHL7Q8IXQ5 586 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 AP1M1Q9BXS5 423 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 ACBD3Q9H3P7 528 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 SLITRK6Q9H5Y7 841 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 AAASQ9NRG9 546 aa23.47■■□□□ 1.35
UBE3C-209ENST00000611269 SYN3O14994 580 aa23.46■■□□□ 1.35
UBE3C-209ENST00000611269 RAD51CO43502 376 aa23.46■■□□□ 1.35
UBE3C-209ENST00000611269 FGGP02679 453 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms