RNA–Protein interactions for RNA: ENST00000611008.4

TARDBP-212, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-212ENST00000611008 USP45Q70EL2 814 aa4.46□□□□□ -1.7
TARDBP-212ENST00000611008 WDR53Q7Z5U6 358 aaPredicted RBP4.46□□□□□ -1.7
TARDBP-212ENST00000611008 RBMXL3Q8N7X1 1067 aaKnown RBP4.46□□□□□ -1.7
TARDBP-212ENST00000611008 C16orf52Q8NHV5 167 aa4.46□□□□□ -1.7
TARDBP-212ENST00000611008 FAM136AQ96C01 138 aa4.46□□□□□ -1.7
TARDBP-212ENST00000611008 NUP88Q99567 741 aaPredicted RBP4.46□□□□□ -1.7
TARDBP-212ENST00000611008 GTPBP4Q9BZE4 634 aaKnown RBP4.46□□□□□ -1.7
TARDBP-212ENST00000611008 NMRK2Q9NPI5 230 aa4.46□□□□□ -1.7
TARDBP-212ENST00000611008 FAM90A8PA6NJQ4 464 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 PRSS44E7EML9 344 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 CTNND1O60716 968 aaKnown RBP4.45□□□□□ -1.7
TARDBP-212ENST00000611008 FAM90A13PP0C7W8 464 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 FAM90A24PP0C7X0 464 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 EDNRBP24530 442 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 MT3P25713 68 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 NANOS2P60321 138 aaKnown RBP4.45□□□□□ -1.7
TARDBP-212ENST00000611008 GTF2H3Q13889 308 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 PGS1Q32NB8 556 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 GFOD2Q3B7J2 385 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 RBM20Q5T481 1227 aaKnown RBP4.45□□□□□ -1.7
TARDBP-212ENST00000611008 CXorf57Q6NSI4 855 aaKnown RBP4.45□□□□□ -1.7
TARDBP-212ENST00000611008 NAPRTQ6XQN6 538 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 GADL1Q6ZQY3 521 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 TCEAL8Q8IYN2 117 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 MAGEB6Q8N7X4 407 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 CLPTM1LQ96KA5 538 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 DLL3Q9NYJ7 618 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 KLHL13Q9P2N7 655 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 IPPQ9Y573 584 aa4.45□□□□□ -1.7
TARDBP-212ENST00000611008 FNDC1Q4ZHG4 1894 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 KRT86O43790 486 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 SOAT2O75908 522 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 ANXA1P04083 346 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 ITGALP20701 1170 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 ATP5F1P24539 256 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 IL1R2P27930 398 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 WASP42768 502 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 HTRA4P83105 476 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 KRT81Q14533 505 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 RBMS2Q15434 407 aaKnown RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 SLC4A10Q6U841 1118 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 NOL8Q76FK4 1167 aaKnown RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 TTC7BQ86TV6 843 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 TTC8Q8TAM2 541 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 CYP2W1Q8TAV3 490 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 HPS3Q969F9 1004 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 COQ8BQ96D53 544 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 MVB12AQ96EY5 273 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 AIFM3Q96NN9 605 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 FAM118BQ9BPY3 351 aa4.44□□□□□ -1.7
TARDBP-212ENST00000611008 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 CFAP20Q9Y6A4 193 aaKnown RBP4.44□□□□□ -1.7
TARDBP-212ENST00000611008 NOTCH4Q99466 2003 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 LY6G6EA0A0G2JKS1 128 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 VSTM5A8MXK1 200 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 E9PLN8 166 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 FTLP02792 175 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 LPOP22079 712 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 SMARCA1P28370 1054 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 CD6P30203 668 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 KCNJ5P48544 419 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 HTR6P50406 440 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 FXR1P51114 621 aaKnown RBP eCLIP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 CYP4F2P78329 520 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 TARDBPQ13148 414 aaKnown RBP eCLIP4.43□□□□□ -1.71e-13■■■■■ 26.9
TARDBP-212ENST00000611008 CERKLQ49MI3 558 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 THEMIS2Q5TEJ8 643 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 NXNQ6DKJ4 435 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 TRIM72Q6ZMU5 477 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 C9orf47Q6ZRZ4 202 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 EPM2AIP1Q7L775 607 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 ZC3H10Q96K80 434 aaKnown RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 VRK1Q99986 396 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 VKORC1Q9BQB6 163 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 HIPK2Q9H2X6 1198 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 SMOC2Q9H3U7 446 aa4.43□□□□□ -1.7
TARDBP-212ENST00000611008 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 TTBK1Q5TCY1 1321 aaPredicted RBP4.43□□□□□ -1.7
TARDBP-212ENST00000611008 PDHA1P08559 390 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 PRF1P14222 555 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 CDC42EP1Q00587 391 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 TRIM71Q2Q1W2 868 aaKnown RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 KHDC1Q4VXA5 237 aaKnown RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 ATAT1Q5SQI0 421 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 CCAR1Q8IX12 1150 aaKnown RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 C3orf20Q8ND61 904 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 PSD4Q8NDX1 1056 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 SLC35G2Q8TBE7 412 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 IFI44Q8TCB0 444 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 DIS3LQ8TF46 1054 aaKnown RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 CUL5Q93034 780 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 C1GALT1C1Q96EU7 318 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 RITA1Q96K30 269 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 CTAGE1Q96RT6 745 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 ACO2Q99798 780 aaKnown RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 MACROD1Q9BQ69 325 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 FOXP1Q9H334 677 aaPredicted RBP4.42□□□□□ -1.7
TARDBP-212ENST00000611008 MAN1C1Q9NR34 630 aa4.42□□□□□ -1.7
TARDBP-212ENST00000611008 DUSP22Q9NRW4 184 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms