RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 ACSL3O95573 720 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 ITGAVP06756 1048 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 CPT1AP50416 773 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 CDR1P51861 262 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 TAF1CQ15572 869 aaPredicted RBP29.48■■■□□ 2.31
CSPG5-205ENST00000610462 GOLGA7BQ2TAP0 167 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 KCNT1Q5JUK3 1230 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 TRIM6Q9C030 488 aaPredicted RBP29.48■■■□□ 2.31
CSPG5-205ENST00000610462 STMN4Q9H169 189 aaPredicted RBP29.48■■■□□ 2.31
CSPG5-205ENST00000610462 MIPP30301 263 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 TNFAIP8L3Q5GJ75 292 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 MFSD5Q6N075 450 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 RELL1Q8IUW5 271 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 C12orf29Q8N999 325 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 SLC35B2Q8TB61 432 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 C18orf25Q96B23 403 aaPredicted RBP29.47■■■□□ 2.31
CSPG5-205ENST00000610462 HAUS1Q96CS2 278 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 FRMD8P1Q9BZ68 369 aaPredicted RBP29.47■■■□□ 2.31
CSPG5-205ENST00000610462 NXF3Q9H4D5 531 aaKnown RBP29.47■■■□□ 2.31
CSPG5-205ENST00000610462 TRPM7Q96QT4 1865 aa29.47■■■□□ 2.31
CSPG5-205ENST00000610462 DNALI1O14645 258 aaPredicted RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 RECQL4O94761 1208 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 ZNF143P52747 638 aaPredicted RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 AUHQ13825 339 aaKnown RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 CCL14Q16627 93 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 CEP128Q6ZU80 1094 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 RASAL3Q86YV0 1011 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 GLIS1Q8NBF1 620 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 DNAJC17Q9NVM6 304 aaKnown RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 E5RJQ4 531 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 TRUB2O95900 331 aaKnown RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 MYL3P08590 195 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 GPD1P21695 349 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 ARSEP51690 589 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 PPP1R26Q5T8A7 1209 aaPredicted RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 OR6B2Q6IFH4 312 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 FAM183BPQ6ZVS7 135 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 BBS12Q6ZW61 710 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 TTC13Q8NBP0 860 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 CMASQ8NFW8 434 aaPredicted RBP29.46■■■□□ 2.31
CSPG5-205ENST00000610462 PWWP2AQ96N64 755 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 ADAM7Q9H2U9 754 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 NINJ2Q9NZG7 142 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 PCSK1NQ9UHG2 260 aa29.46■■■□□ 2.31
CSPG5-205ENST00000610462 MANSC4A6NHS7 340 aaPredicted RBP29.45■■■□□ 2.31
CSPG5-205ENST00000610462 EBAG9O00559 213 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 PCK1P35558 622 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 SLCO1A2P46721 670 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 IFI35P80217 286 aaPredicted RBP29.45■■■□□ 2.31
CSPG5-205ENST00000610462 SNX17Q15036 470 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 KYNUQ16719 465 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 C9orf57Q5W0N0 161 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 NLRP14Q86W24 1093 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 ZCCHC9Q8N567 271 aaKnown RBP29.45■■■□□ 2.31
CSPG5-205ENST00000610462 CNPY3Q9BT09 278 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 AP5M1Q9H0R1 490 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 UBQLN1Q9UMX0 589 aaKnown RBP29.45■■■□□ 2.31
CSPG5-205ENST00000610462 Q9Y3F1 56 aa29.45■■■□□ 2.31
CSPG5-205ENST00000610462 TREHO43280 583 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 ZSCAN5DPP0CG00 497 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 SEC24CP53992 1094 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 PKDCCQ504Y2 493 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 GLRA4Q5JXX5 417 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 SRLQ86TD4 932 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 ACOT1Q86TX2 421 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 USP18Q9UMW8 372 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 C2CD4BA6NLJ0 364 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 CST8O60676 142 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 MMP13P45452 471 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 KCTD6Q8NC69 237 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 TMEM40Q8WWA1 233 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 SERPINB12Q96P63 405 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 PPANQ9NQ55 473 aaKnown RBP29.44■■■□□ 2.3
CSPG5-205ENST00000610462 PIN4Q9Y237 131 aaKnown RBP29.44■■■□□ 2.3
CSPG5-205ENST00000610462 RRP15Q9Y3B9 282 aaKnown RBP29.44■■■□□ 2.3
CSPG5-205ENST00000610462 NME7Q9Y5B8 376 aa29.44■■■□□ 2.3
CSPG5-205ENST00000610462 E7EVH7 732 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 SETSIPP0DME0 302 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 ETS1P14921 441 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 CYP2B6P20813 491 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 PLCB3Q01970 1234 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 UNC93AQ86WB7 457 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 MYCBPAPQ8TBZ2 947 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 RXFP2Q8WXD0 754 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 CENPTQ96BT3 561 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 CCT8L2Q96SF2 557 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 APOL6Q9BWW8 343 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 PCDH9Q9HC56 1237 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 TPX2Q9ULW0 747 aaKnown RBP29.43■■■□□ 2.3
CSPG5-205ENST00000610462 PIK3R2O00459 728 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 AKAP5P24588 427 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 ZNF157P51786 506 aaPredicted RBP29.43■■■□□ 2.3
CSPG5-205ENST00000610462 DYNLT1P63172 113 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 ZNF200P98182 395 aaPredicted RBP29.43■■■□□ 2.3
CSPG5-205ENST00000610462 BEX3Q00994 111 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 OTUD4Q01804 1114 aaKnown RBP29.43■■■□□ 2.3
CSPG5-205ENST00000610462 PPARDQ03181 441 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 GPS1Q13098 491 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 TRNP1Q6NT89 227 aa29.43■■■□□ 2.3
CSPG5-205ENST00000610462 C17orf99Q6UX52 265 aa29.43■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms