RNA–Protein interactions for RNA: ENST00000609959.1

CCDC144B-206, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 5

Gene CCDC144B, Length 808 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-206ENST00000609959 PTPN21Q16825 1174 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 SERPINA13PQ6UXR4 307 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 ZNF813Q6ZN06 617 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 ABHD11Q8NFV4 315 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 THOC3Q96J01 351 aaKnown RBP4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 RITA1Q96K30 269 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 POT1Q9NUX5 634 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 TFCP2L1Q9NZI6 479 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 SCAF8Q9UPN6 1271 aaKnown RBP4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 CADPSQ9ULU8 1353 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 SBNO2Q9Y2G9 1366 aa4.09□□□□□ -1.75
CCDC144B-206ENST00000609959 FCHO1O14526 889 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 GNAI2P04899 355 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 PDHA1P08559 390 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 RARBP10826 455 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 LIPAP38571 399 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 FXR1P51114 621 aaKnown RBP eCLIP4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 GPSM2P81274 684 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 AMPD3Q01432 767 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 BOP1Q14137 746 aaKnown RBP4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 ERV3-1Q14264 604 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 ZNF268Q14587 947 aaPredicted RBP4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 LVRNQ6Q4G3 990 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 LAYNQ6UX15 382 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 TMEM108Q6UXF1 575 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 MAVSQ7Z434 540 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 FAM90A1Q86YD7 464 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 C3orf20Q8ND61 904 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 FOXP1Q9H334 677 aaPredicted RBP4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 GLOD4Q9HC38 313 aa4.08□□□□□ -1.76
CCDC144B-206ENST00000609959 WASHC2CQ9Y4E1 1318 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 LY6G6EA0A0G2JKS1 128 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 EME2A4GXA9 379 aaPredicted RBP4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 ABLIM3O94929 683 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 FTH1P19P0C7X4 201 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 CYP2A6P11509 494 aaPredicted RBP4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 PRF1P14222 555 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 PIK3CGP48736 1102 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 CLCN2P51788 898 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 TPTEP56180 551 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 HYAL1Q12794 435 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 TCF15Q12870 199 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 KRTAP27-1Q3LI81 207 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 C10orf25Q5T742 122 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 USP37Q86T82 979 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 PIM3Q86V86 326 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 PRPF38AQ8NAV1 312 aaKnown RBP4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 MACROD1Q9BQ69 325 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 HIPK2Q9H2X6 1198 aa4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 TCF20Q9UGU0 1960 aaKnown RBP4.07□□□□□ -1.76
CCDC144B-206ENST00000609959 PRSS44E7EML9 344 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 KRT86O43790 486 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 EXOC3O60645 756 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 ARIH2O95376 493 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 FESP07332 822 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 T-ENOLP0DO92 83 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 PDCP20941 246 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 MT3P25713 68 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 KRT81Q14533 505 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 KIF22Q14807 665 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 MEX3CQ5U5Q3 659 aaKnown RBP4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 FCRL6Q6DN72 434 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 C9orf47Q6ZRZ4 202 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 PPP1R32Q7Z5V6 425 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 TERB1Q8NA31 727 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 ZBTB8BQ8NAP8 495 aaPredicted RBP4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 XAGE5Q8WWM1 108 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 TNPO1Q92973 898 aaKnown RBP4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 SNX18Q96RF0 628 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 SLC13A1Q9BZW2 595 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 TINAGL1Q9GZM7 467 aaPredicted RBP4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 MRPL46Q9H2W6 279 aaKnown RBP4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 ABCF2Q9UG63 623 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 POLHQ9Y253 713 aa4.06□□□□□ -1.76
CCDC144B-206ENST00000609959 TMEM232C9JQI7 657 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 H3BNX3 289 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 M0QYG6 137 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 TJP3O95049 919 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 CRYABP02511 175 aaKnown RBP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 AHSGP02765 367 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 TGFB3P10600 412 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 HK3P52790 923 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 SP2Q02086 613 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 NOGQ13253 232 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 C4orf46Q504U0 113 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 RNF187Q5TA31 235 aaPredicted RBP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 FAM160B1Q5W0V3 765 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 KIRREL2Q6UWL6 708 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 Q6ZWC4 215 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 PPP1R3BQ86XI6 285 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 KRT78Q8N1N4 520 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 MIER2Q8N344 545 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 PRR18Q8N4B5 295 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 ZC3H10Q96K80 434 aaKnown RBP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 FYTTD1Q96QD9 318 aaKnown RBP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 SMAD5Q99717 465 aaKnown RBP4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 ZDHHC8Q9ULC8 765 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 SQORQ9Y6N5 450 aa4.05□□□□□ -1.76
CCDC144B-206ENST00000609959 A1L4Q6 167 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms