RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 KCNE1P15382 129 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 CYP3A5P20815 502 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 GPD1P21695 349 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 FGFR4P22455 802 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 KDELR1P24390 212 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 CRYBB1P53674 252 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-206ENST00000609853 MORF4L2Q15014 288 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 XKR4Q5GH76 650 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 TNFAIP8L3Q5GJ75 292 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 FAM102AQ5T9C2 384 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-206ENST00000609853 IZUMO3Q5VZ72 239 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 CST9Q5W186 159 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 ARHGAP17Q68EM7 881 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 HIBCHQ6NVY1 386 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-206ENST00000609853 C17orf99Q6UX52 265 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 VSIG1Q86XK7 387 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 SLC35B2Q8TB61 432 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF560Q96MR9 790 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 TTC25Q96NG3 672 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 OSMRQ99650 979 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 APBA2Q99767 749 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 CCDC77Q9BR77 488 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 PHACTR1Q9C0D0 580 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 RSAD1Q9HA92 442 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 PCDH9Q9HC56 1237 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 HESX1Q9UBX0 185 aa12.56□□□□□ -0.4
USP6NL-206ENST00000609853 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.56□□□□□ -0.4
USP6NL-206ENST00000609853 C2CD4BA6NLJ0 364 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 DPYSL4O14531 572 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 DNALI1O14645 258 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 ECM2O94769 699 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 TRUB2O95900 331 aaKnown RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 IGHA2P01877 340 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 ABHD2P08910 425 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 FAM163BP0C2L3 166 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 HOXC8P31273 242 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 SCNN1AP37088 669 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 MMP13P45452 471 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 SNX17Q15036 470 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 TRIP13Q15645 432 aaPredicted RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 PKDCCQ504Y2 493 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 C9orf57Q5W0N0 161 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 TXNRD3NBQ6F5E7 133 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 SESTD1Q86VW0 696 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 RASAL3Q86YV0 1011 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 ARFGAP1Q8N6T3 406 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 ZMAT2Q96NC0 199 aaKnown RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 SLC4A5Q9BY07 1137 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 KLHL11Q9NVR0 708 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 GDAP2Q9NXN4 497 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 TPX2Q9ULW0 747 aaKnown RBP12.55□□□□□ -0.4
USP6NL-206ENST00000609853 USP18Q9UMW8 372 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 GINS2Q9Y248 185 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 SNX9Q9Y5X1 595 aa12.55□□□□□ -0.4
USP6NL-206ENST00000609853 TRIP12Q14669 1992 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 IGF2BP3O00425 579 aaKnown RBP eCLIP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PIRO00625 290 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 RECQL4O94761 1208 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 FAM107AO95990 144 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 RPLP2P05387 115 aaKnown RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 MIPP30301 263 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ZNF157P51786 506 aaPredicted RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TMEM62Q0P6H9 643 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ORC1Q13415 861 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TFDP2Q14188 446 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 GOLGA7BQ2TAP0 167 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 P3H1Q32P28 736 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 BOLA3Q53S33 107 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 FBXO47Q5MNV8 452 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PRAMEF19Q5SWL8 479 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TAF2Q6P1X5 1199 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ARCQ7LC44 396 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TMEM110Q86TL2 294 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 MAP7D3Q8IWC1 876 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 CRYBG2Q8N1P7 616 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 UBA3Q8TBC4 463 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 DNAJB3Q8WWF6 145 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TBCBQ99426 244 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 EIF2AQ9BY44 585 aaKnown RBP12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ZWILCHQ9H900 591 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PPCSQ9HAB8 311 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 CDHR5Q9HBB8 845 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 FLRT1Q9NZU1 646 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TJP2Q9UDY2 1190 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 RSPH14Q9UHP6 348 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 SHOC2Q9UQ13 582 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TLDC2A0PJX2 215 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 GMNCA6NCL1 334 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 APOC4-APOC2K7ER74 178 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 TRAPPC3O43617 180 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 CST8O60676 142 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 ENDOD1O94919 500 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 APOC2P02655 101 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PFKMP08237 780 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 MYL3P08590 195 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 PDGFRAP16234 1089 aa12.54□□□□□ -0.4
USP6NL-206ENST00000609853 IL1R2P27930 398 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms