RNA–Protein interactions for RNA: ENST00000609445.5

SGMS1-209, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-209ENST00000609445 NCOR2Q9Y618 2525 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 DNAH14Q0VDD8 3507 aa17.13■□□□□ 0.33
SGMS1-209ENST00000609445 TNNI1P19237 187 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 WARSP23381 471 aaKnown RBP17.12■□□□□ 0.33
SGMS1-209ENST00000609445 BDNFP23560 247 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 MAGEA11P43364 429 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 FOXK2Q01167 660 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 DNM1Q05193 864 aaKnown RBP17.12■□□□□ 0.33
SGMS1-209ENST00000609445 RUNX3Q13761 415 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 NAIF1Q69YI7 327 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-209ENST00000609445 C4orf50Q6ZRC1 276 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 ERMP1Q7Z2K6 904 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 XXYLT1Q8NBI6 393 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 ZNF516Q92618 1163 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 MYRFLQ96LU7 910 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 FNBP1Q96RU3 617 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 GZF1Q9H116 711 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-209ENST00000609445 KIF9Q9HAQ2 790 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 PARD6AQ9NPB6 346 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 FAM13BQ9NYF5 915 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 MAGEC2Q9UBF1 373 aaPredicted RBP17.12■□□□□ 0.33
SGMS1-209ENST00000609445 SERTAD1Q9UHV2 236 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 RALGAPA1Q6GYQ0 2036 aa17.12■□□□□ 0.33
SGMS1-209ENST00000609445 C2orf78A6NCI8 922 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 SOBPA7XYQ1 873 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 HRO43593 1189 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 CYP27A1Q02318 531 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 ZNF268Q14587 947 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-209ENST00000609445 MDH1BQ5I0G3 518 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 FSTL4Q6MZW2 842 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 PRR23BQ6ZRT6 265 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 HS2ST1Q7LGA3 356 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 ARL14EPQ8N8R7 260 aaPredicted RBP17.11■□□□□ 0.33
SGMS1-209ENST00000609445 PLEKHO2Q8TD55 490 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 FBRSL1Q9HCM7 1045 aaKnown RBP17.11■□□□□ 0.33
SGMS1-209ENST00000609445 RAB23Q9ULC3 237 aa17.11■□□□□ 0.33
SGMS1-209ENST00000609445 TRAV19A0A0A6YYK7 116 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 PAPSS2O95340 614 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-209ENST00000609445 CKMP06732 381 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 TGM1P22735 817 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 CASP4P49662 377 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 MYL6P60660 151 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 USP46P62068 366 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 USP4Q13107 963 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 MTF1Q14872 753 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 ZNF77Q15935 545 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 BMT2Q1RMZ1 405 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 RSPO4Q2I0M5 234 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-209ENST00000609445 TMEM196Q5HYL7 178 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 CC2D1AQ6P1N0 951 aaPredicted RBP17.1■□□□□ 0.33
SGMS1-209ENST00000609445 OR6B3Q8NGW1 331 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
SGMS1-209ENST00000609445 PCED1BQ96HM7 432 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 CHAMP1Q96JM3 812 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 SNX25Q9H3E2 840 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 GCNT4Q9P109 453 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 GMEB2Q9UKD1 530 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 WNT6Q9Y6F9 365 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 SPAG17Q6Q759 2223 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 MYO16Q9Y6X6 1858 aa17.1■□□□□ 0.33
SGMS1-209ENST00000609445 PVALEFA0A1B0GWK0 134 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 KLRC4O43908 158 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 EGFP01133 1207 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 USP17L7P0C7H9 530 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 GNL1P36915 607 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-209ENST00000609445 GRIK1P39086 918 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 CACNA2D1P54289 1103 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 SNRPFP62306 86 aaKnown RBP17.09■□□□□ 0.33
SGMS1-209ENST00000609445 FAM160A1Q05DH4 1040 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 SIM2Q14190 667 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-209ENST00000609445 PUM1Q14671 1186 aaKnown RBP eCLIP17.09■□□□□ 0.334e-6■■□□□ 12.3
SGMS1-209ENST00000609445 WDR72Q3MJ13 1102 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 VSTM1Q6UX27 236 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 DGLUCYQ7Z3D6 616 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 SYNPOQ8N3V7 929 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 MYCBPAPQ8TBZ2 947 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 ELMO3Q96BJ8 720 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 SPATA17Q96L03 361 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 DPEP3Q9H4B8 488 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 TMEM30AQ9NV96 361 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 POLR3BQ9NW08 1133 aaPredicted RBP17.09■□□□□ 0.33
SGMS1-209ENST00000609445 DUS2Q9NX74 493 aaKnown RBP17.09■□□□□ 0.33
SGMS1-209ENST00000609445 DLL3Q9NYJ7 618 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 RCOR1Q9UKL0 485 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
SGMS1-209ENST00000609445 EML5Q05BV3 1969 aa17.08■□□□□ 0.33
SGMS1-209ENST00000609445 MED19A0JLT2 244 aaPredicted RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 TRDMT1O14717 391 aaKnown RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 ACTN4O43707 911 aaKnown RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 EXOC3O60645 756 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 TACC1O75410 805 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 PDIA4P13667 645 aaKnown RBP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 GJA4P35212 333 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 TNNC1P63316 161 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 SPEM2Q0P670 501 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 GRSF1Q12849 480 aaKnown RBP eCLIP17.08■□□□□ 0.32
SGMS1-209ENST00000609445 TRPC3Q13507 836 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 KCNB1Q14721 858 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 PDGFRLQ15198 375 aa17.08■□□□□ 0.32
SGMS1-209ENST00000609445 MAPRE1Q15691 268 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms