RNA–Protein interactions for RNA: ENST00000608957.5

LINC00539-204, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 869 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-204ENST00000608957 TMEM150AQ86TG1 271 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 GPIHBP1Q8IV16 184 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 SLC9A9Q8IVB4 645 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 DCP1BQ8IZD4 617 aaKnown RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 TMEM86AQ8N2M4 240 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 LEMD2Q8NC56 503 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 ZSCAN18Q8TBC5 510 aaPredicted RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 C2orf15Q8WU43 125 aaKnown RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 TMEM174Q8WUU8 243 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 ACBD6Q9BR61 282 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 MRPL45Q9BRJ2 306 aaKnown RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 TUBGCP2Q9BSJ2 902 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 DDX23Q9BUQ8 820 aaKnown RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 FOXQ1Q9C009 403 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 XYLT2Q9H1B5 865 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 VPS16Q9H269 839 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 TRPV4Q9HBA0 871 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 RTN4Q9NQC3 1192 aaKnown RBP12.33□□□□□ -0.44
LINC00539-204ENST00000608957 DLGAP2Q9P1A6 1054 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 ASB3Q9Y575 518 aa12.33□□□□□ -0.44
LINC00539-204ENST00000608957 H0Y858 1186 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 EXOC3O60645 756 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 DCNP07585 359 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 WARSP23381 471 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 CYP2F1P24903 491 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 GABRR2P28476 465 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 MYL6P60660 151 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 PSMC1P62191 440 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 DLG4P78352 724 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 MYL7Q01449 175 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 TSPY1Q01534 308 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 SMARCB1Q12824 385 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 MLF2Q15773 248 aaPredicted RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 SLC44A4Q53GD3 710 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 C1orf220Q5T0J3 134 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 TDRD10Q5VZ19 366 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 CEP135Q66GS9 1140 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 FAM171BQ6P995 826 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 TMC6Q7Z403 805 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 ALYREFQ86V81 257 aaKnown RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 VSTM4Q8IW00 320 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 CCDC105Q8IYK2 499 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 SPATA18Q8TC71 538 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 SMARCD2Q92925 531 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 LRRC3BQ96PB8 259 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 FNBP1Q96RU3 617 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 PRRX2Q99811 253 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 ZFP14Q9HCL3 533 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 CRTAC1Q9NQ79 661 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 MTF2Q9Y483 593 aaPredicted RBP12.32□□□□□ -0.44
LINC00539-204ENST00000608957 PCDHB5Q9Y5E4 795 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
LINC00539-204ENST00000608957 HEPACAM2A8MVW5 462 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 TEX33O43247 280 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 TADA3O75528 432 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 AKAP3O75969 853 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 PRAMEF12O95522 483 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 F11P03951 625 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 CD72P21854 359 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 LHX1P48742 406 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 NUBP1P53384 320 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 CLDN10P78369 228 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 MYO1EQ12965 1108 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 DDR2Q16832 855 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 VWA3BQ502W6 1294 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 GPR158Q5T848 1215 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 DPH6Q7L8W6 267 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 FRMD5Q7Z6J6 570 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 ITIH5Q86UX2 942 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 DTWD2Q8NBA8 298 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 PJA1Q8NG27 643 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 TRIM44Q96DX7 344 aaPredicted RBP12.31□□□□□ -0.44
LINC00539-204ENST00000608957 SYT15Q9BQS2 421 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 ATXN3LQ9H3M9 355 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 METTL14Q9HCE5 456 aaKnown RBP12.31□□□□□ -0.44
LINC00539-204ENST00000608957 HEBP1Q9NRV9 189 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 IMPACTQ9P2X3 320 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 MYO16Q9Y6X6 1858 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 ITIH6Q6UXX5 1313 aa12.31□□□□□ -0.44
LINC00539-204ENST00000608957 MYOFQ9NZM1 2061 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 ARNTLO00327 626 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 STK25O00506 426 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 PES1O00541 588 aaKnown RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 STAU1O95793 577 aaKnown RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 PDGFRBP09619 1106 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 TARSP26639 723 aaKnown RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 PSMC2P35998 433 aaKnown RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 PBX1P40424 430 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 UBXN1Q04323 297 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 NFE2Q16621 373 aaPredicted RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 MIIPQ5JXC2 388 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 FKBP15Q5T1M5 1219 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 TPRG1Q6ZUI0 275 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 ARID3BQ8IVW6 561 aaPredicted RBP12.3□□□□□ -0.44
LINC00539-204ENST00000608957 MFSD6LQ8IWD5 586 aa12.3□□□□□ -0.44
LINC00539-204ENST00000608957 TRIM59Q8IWR1 403 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms