RNA–Protein interactions for RNA: ENST00000607814.5

CTSA-218, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-218ENST00000607814 CYP11A1P05108 521 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 DLG4P78352 724 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 GPR17Q13304 367 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 PSMD6Q15008 389 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 TEAD2Q15562 447 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 ARHGAP29Q52LW3 1261 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 CEP135Q66GS9 1140 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 CENPPQ6IPU0 288 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 Q6ZS52 159 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 TRAPPC11Q7Z392 1133 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 STKLD1Q8NE28 680 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 SHKBP1Q8TBC3 707 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 HPDLQ96IR7 371 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 ZC3H10Q96K80 434 aaKnown RBP14.6□□□□□ -0.07
CTSA-218ENST00000607814 ZNF560Q96MR9 790 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 FNBP1Q96RU3 617 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 SEPT5Q99719 369 aaPredicted RBP14.6□□□□□ -0.07
CTSA-218ENST00000607814 KIAA1586Q9HCI6 787 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.6□□□□□ -0.07
CTSA-218ENST00000607814 OBP2AQ9NY56 170 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 ITGA11Q9UKX5 1188 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 YIPF1Q9Y548 306 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 WDFY3Q8IZQ1 3526 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 NCANO14594 1321 aa14.6□□□□□ -0.07
CTSA-218ENST00000607814 RHOBTB3O94955 611 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 NR3C1P04150 777 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 GPR15P49685 360 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 PLCB2Q00722 1185 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 COL9A2Q14055 689 aaPredicted RBP14.59□□□□□ -0.07
CTSA-218ENST00000607814 SOWAHAQ2M3V2 549 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 WDR44Q5JSH3 913 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 SDHAF4Q5VUM1 108 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 TXNDC11Q6PKC3 985 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 WDR49Q8IV35 697 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 THEM5Q8N1Q8 247 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 KDF1Q8NAX2 398 aaPredicted RBP14.59□□□□□ -0.07
CTSA-218ENST00000607814 CGRRF1Q99675 332 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 LPIN3Q9BQK8 851 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 ZCWPW1Q9H0M4 648 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 DNAJC25Q9H1X3 360 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 VPS45Q9NRW7 570 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 DMAC2Q9NW81 257 aa14.59□□□□□ -0.07
CTSA-218ENST00000607814 RALYQ9UKM9 306 aaKnown RBP14.59□□□□□ -0.07
CTSA-218ENST00000607814 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.59□□□□□ -0.07
CTSA-218ENST00000607814 TSC2P49815 1807 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 TMEM8BA6NDV4 472 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 LRRIQ3A6PVS8 624 aaPredicted RBP14.58□□□□□ -0.08
CTSA-218ENST00000607814 HUS1O60921 280 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 ATG13O75143 517 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 ATP2C2O75185 946 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 FGF19O95750 216 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 MYL1P05976 194 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 PDGFRBP09619 1106 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 LMO2P25791 158 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 WEE1P30291 646 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 PNPLA4P41247 253 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 SOX9P48436 509 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 MYL6P60660 151 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 MYBPC2Q14324 1141 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 SURF1Q15526 300 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 MGAT5BQ3V5L5 792 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 UNQ6494/PRO21346Q6UXR6 183 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 C12orf56Q8IXR9 622 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 LRRC52Q8N7C0 313 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 GIPC2Q8TF65 315 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 RSPRY1Q96DX4 576 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 MMS19Q96T76 1030 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 LRRC3Q9BY71 257 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 RXFP3Q9NSD7 469 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 C2orf42Q9NWW7 574 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 DDX43Q9NXZ2 648 aaKnown RBP14.58□□□□□ -0.08
CTSA-218ENST00000607814 ABI2Q9NYB9 513 aaPredicted RBP14.58□□□□□ -0.08
CTSA-218ENST00000607814 GTF3C4Q9UKN8 822 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 DSEQ9UL01 958 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 R3HCC1Q9Y3T6 440 aaKnown RBP14.58□□□□□ -0.08
CTSA-218ENST00000607814 DMXL2Q8TDJ6 3036 aa14.58□□□□□ -0.08
CTSA-218ENST00000607814 A0A1W2PRU2 124 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 PDXKO00764 312 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 DPYSL4O14531 572 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 CLSTN1O94985 981 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 SNRPFP62306 86 aaKnown RBP14.57□□□□□ -0.08
CTSA-218ENST00000607814 FAM160A1Q05DH4 1040 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 ACAP1Q15027 740 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 TDRD10Q5VZ19 366 aaKnown RBP14.57□□□□□ -0.08
CTSA-218ENST00000607814 KBTBD6Q86V97 674 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 TMC8Q8IU68 726 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 ARID3BQ8IVW6 561 aaPredicted RBP14.57□□□□□ -0.08
CTSA-218ENST00000607814 ADGRF2Q8IZF7 708 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 CAMKK1Q8N5S9 505 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 CCDC47Q96A33 483 aaKnown RBP14.57□□□□□ -0.08
CTSA-218ENST00000607814 PI4K2AQ9BTU6 479 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 GTSE1Q9NYZ3 720 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 NXF1Q9UBU9 619 aaKnown RBP14.57□□□□□ -0.08
CTSA-218ENST00000607814 ZMIZ1Q9ULJ6 1067 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 ASB3Q9Y575 518 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 NME7Q9Y5B8 376 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 PCDHA5Q9Y5H7 936 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 NBEAQ8NFP9 2946 aa14.57□□□□□ -0.08
CTSA-218ENST00000607814 AKAP13Q12802 2813 aa14.56□□□□□ -0.08
CTSA-218ENST00000607814 CALUO43852 315 aaPredicted RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms