RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 PATJQ8NI35 1801 aa19.33■□□□□ 0.69
CCDC12-208ENST00000603885 C4BPAP04003 597 aaKnown RBP19.33■□□□□ 0.68
CCDC12-208ENST00000603885 CCNE1P24864 410 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 ANXA13P27216 316 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 GRIK1P39086 918 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 KCNB1Q14721 858 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF667Q5HYK9 610 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 MAML2Q8IZL2 1156 aaPredicted RBP19.33■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF687Q8N1G0 1237 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 TMC2Q8TDI7 906 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 ZFYVE19Q96K21 471 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 SPATA17Q96L03 361 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 SEMA4AQ9H3S1 761 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 KIF9Q9HAQ2 790 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 TDP1Q9NUW8 608 aa19.33■□□□□ 0.68
CCDC12-208ENST00000603885 GOLGA6L4A6NEF3 574 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 A8MXQ7 604 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 TRIM66O15016 1216 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 TADA3O75528 432 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 PTPN1P18031 435 aaKnown RBP19.32■□□□□ 0.68
CCDC12-208ENST00000603885 DLG4P78352 724 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 FZD5Q13467 585 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 GUF1Q8N442 669 aaKnown RBP19.32■□□□□ 0.68
CCDC12-208ENST00000603885 USP13Q92995 863 aaPredicted RBP19.32■□□□□ 0.68
CCDC12-208ENST00000603885 SMYD3Q9H7B4 428 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 TRPC7Q9HCX4 862 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 GTSE1Q9NYZ3 720 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 MAPK8IP1Q9UQF2 711 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 NME7Q9Y5B8 376 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 R4GN57 208 aa19.32■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF638Q14966 1978 aaKnown RBP19.32■□□□□ 0.68
CCDC12-208ENST00000603885 PTPRDP23468 1912 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 IKBKBO14920 756 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 MAPK13O15264 365 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 P4HA1P13674 534 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 NR2F2P24468 414 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF268Q14587 947 aaPredicted RBP19.31■□□□□ 0.68
CCDC12-208ENST00000603885 NFIL3Q16649 462 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF528Q3MIS6 628 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 ZACNQ401N2 412 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 DENND5BQ6ZUT9 1274 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 RALGPS2Q86X27 583 aaPredicted RBP19.31■□□□□ 0.68
CCDC12-208ENST00000603885 B3GALNT2Q8NCR0 500 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 IER2Q9BTL4 223 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 ELOVL4Q9GZR5 314 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 CHRDQ9H2X0 955 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 DPEP3Q9H4B8 488 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 LMAN1LQ9HAT1 526 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 EHD2Q9NZN4 543 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
CCDC12-208ENST00000603885 PTPRZ1P23471 2315 aaPredicted RBP19.31■□□□□ 0.68
CCDC12-208ENST00000603885 FAM186AA6NE01 2351 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 WDR87Q6ZQQ6 2873 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 TRAV19A0A0A6YYK7 116 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 SPECC1L-ADORA2AF8WAN1 911 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 VNN1O95497 513 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 RPL13P26373 211 aaKnown RBP19.3■□□□□ 0.68
CCDC12-208ENST00000603885 CTHP32929 405 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 SOX9P48436 509 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 CSTF1Q05048 431 aaKnown RBP19.3■□□□□ 0.68
CCDC12-208ENST00000603885 TNK2Q07912 1038 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 MTAPQ13126 283 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 SGSM1Q2NKQ1 1148 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 ITPRIPL2Q3MIP1 535 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 SCARA5Q6ZMJ2 495 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 TTC8Q8TAM2 541 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 GKN1Q9NS71 199 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 CFAP54Q96N23 3096 aa19.3■□□□□ 0.68
CCDC12-208ENST00000603885 KIF26AQ9ULI4 1882 aaPredicted RBP19.29■□□□□ 0.68
CCDC12-208ENST00000603885 F8VP50 259 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 CKMP06732 381 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 USP17L7P0C7H9 530 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 RAP1GAPP47736 663 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 VAMP7P51809 220 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 CDH8P55286 799 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 FAM160A1Q05DH4 1040 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 LRRC32Q14392 662 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 CC2D1AQ6P1N0 951 aaPredicted RBP19.29■□□□□ 0.68
CCDC12-208ENST00000603885 INTS8Q75QN2 995 aaKnown RBP19.29■□□□□ 0.68
CCDC12-208ENST00000603885 SV2AQ7L0J3 742 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 FMR1NBQ8N0W7 255 aaPredicted RBP19.29■□□□□ 0.68
CCDC12-208ENST00000603885 TAF4BQ92750 862 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 TNIP3Q96KP6 325 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 C8orf48Q96LL4 319 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 FAM83CQ9BQN1 747 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 ZNF518BQ9C0D4 1074 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 PRMT8Q9NR22 394 aaPredicted RBP19.29■□□□□ 0.68
CCDC12-208ENST00000603885 GREB1Q4ZG55 1949 aa19.29■□□□□ 0.68
CCDC12-208ENST00000603885 ATP8B3O60423 1300 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 AKAP3O75969 853 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 LMNAP02545 664 aaKnown RBP19.28■□□□□ 0.68
CCDC12-208ENST00000603885 CHRNB1P11230 501 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 KRT13P13646 458 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 PIK3CAP42336 1068 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 PDE6CP51160 858 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 USP46P62068 366 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 NOP14P78316 857 aaKnown RBP19.28■□□□□ 0.68
CCDC12-208ENST00000603885 C1orf220Q5T0J3 134 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 TXNDC11Q6PKC3 985 aa19.28■□□□□ 0.68
CCDC12-208ENST00000603885 FAM186BQ8IYM0 893 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms