RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 TROVE2P10155 538 aaKnown RBP eCLIP16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 UCHL3P15374 230 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 MTTPP55157 894 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 HTRA3P83110 453 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 PPP2R5EQ16537 467 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 GSTA3Q16772 222 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 DAB2IPQ5VWQ8 1189 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 NT5DC3Q86UY8 548 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 GLYCTKQ8IVS8 523 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 CHST13Q8NET6 341 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 RAB3IL1Q8TBN0 382 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 FBXO40Q9UH90 709 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 DNAJC12Q9UKB3 198 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 ASMTLO95671 621 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 VTNP04004 478 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 KRT19P08727 400 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 MYL7Q01449 175 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 PLOD1Q02809 727 aaPredicted RBP16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 GPRASP2Q96D09 838 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 C9orf72Q96LT7 481 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 KRT82Q9NSB4 513 aa16.08■□□□□ 0.16
PPFIA3-206ENST00000602655 CES2O00748 559 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 RNASEH1O60930 286 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SUPT20HL2P0C7V6 817 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 PON1P27169 355 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 YARSP54577 528 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 GALCP54803 685 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 PPP3CAQ08209 521 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SH3D19Q5HYK7 790 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SCARA3Q6AZY7 606 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 RINLQ6ZS11 566 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ARMCX2Q7L311 632 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 RIOX2Q8IUF8 465 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ERLEC1Q96DZ1 483 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 BTBD10Q9BSF8 475 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 EDEM3Q9BZQ6 932 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ROPN1BQ9BZX4 212 aaPredicted RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ROPN1Q9HAT0 212 aaPredicted RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 XPNPEP1Q9NQW7 623 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 FRMPD4Q14CM0 1322 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ARHGAP42A6NI28 874 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 AMPD1P23109 780 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 YY1P25490 414 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SPARCL1Q14515 664 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 MMEL1Q495T6 779 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 TMEM259Q4ZIN3 620 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SCARA5Q6ZMJ2 495 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ARHGAP24Q8N264 748 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ATP11CQ8NB49 1132 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 MIPEPQ99797 713 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 RNPEPQ9H4A4 650 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 PCDH10Q9P2E7 1040 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 STX18Q9P2W9 335 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 HEY2Q9UBP5 337 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 FAM47DPA6NHR8 397 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 CXCL11O14625 94 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 GSC2O15499 205 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 NOL4O94818 638 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 DCTN2Q13561 401 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 DHX34Q14147 1143 aaKnown RBP16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 C1orf146Q5VVC0 180 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 LRRC57Q8N9N7 239 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 XXYLT1Q8NBI6 393 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SLC35G2Q8TBE7 412 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 C12orf42Q96LP6 360 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 PWWP2AQ96N64 755 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 SERPINB12Q96P63 405 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 PTPN18Q99952 460 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ECSITQ9BQ95 431 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 EBF3Q9H4W6 596 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ZNF212Q9UDV6 495 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 NAALADL1Q9UQQ1 740 aa16.07■□□□□ 0.16
PPFIA3-206ENST00000602655 ADRB2P07550 413 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 NFKBIAP25963 317 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SFNP31947 248 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 DRAP1Q14919 205 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SEPT1Q8WYJ6 367 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 TXLNGYQ9BZA5 131 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 METTL14Q9HCE5 456 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 TBX20Q9UMR3 447 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SIGLEC16A6NMB1 481 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 PODXLO00592 558 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 CD58P19256 250 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 PPIL2Q13356 520 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 ORC1Q13415 861 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SNRNP35Q16560 246 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 GRAMD1BQ3KR37 738 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SEL1L2Q5TEA6 688 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 PRUNE1Q86TP1 453 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 HAPLN3Q96S86 360 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 ARL8BQ9NVJ2 186 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 UBAP1Q9NZ09 502 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 HSFX1Q9UBD0 423 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 SPATA31C2B4DYI2 1134 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 ATMINO43313 823 aaPredicted RBP16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 TRPA1O75762 1119 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 GJC1P36383 396 aa16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 TMED10P49755 219 aaKnown RBP16.06■□□□□ 0.16
PPFIA3-206ENST00000602655 VAMP7P51809 220 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms