RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 SETXQ7Z333 2677 aaKnown RBP17.25■□□□□ 0.35
SSBP4-211ENST00000601614 ACACAQ13085 2346 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 CELSR3Q9NYQ7 3312 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 TRAV19A0A0A6YYK7 116 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 TISP43B9A030 160 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 CKMP06732 381 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 USP17L7P0C7H9 530 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 MAP7D1Q3KQU3 841 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 SCARA3Q6AZY7 606 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 SLC23A3Q6PIS1 610 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 CD302Q8IX05 232 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 DCP1BQ8IZD4 617 aaKnown RBP17.25■□□□□ 0.35
SSBP4-211ENST00000601614 ALLCQ8N6M5 410 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 TRMT2BQ96GJ1 504 aaKnown RBP17.25■□□□□ 0.35
SSBP4-211ENST00000601614 ZDHHC4Q9NPG8 344 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 KCNG1Q9UIX4 513 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 DERAQ9Y315 318 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 PTPRBP23467 1997 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 APC2O95996 2303 aa17.25■□□□□ 0.35
SSBP4-211ENST00000601614 UPK3BL1B0FP48 263 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 ANKRD63C9JTQ0 380 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 UPK3BL2E5RIL1 263 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 SGK1O00141 431 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 PLA2G4BP0C869 781 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 ITPKAP23677 461 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 EMC10Q5UCC4 262 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 PEAR1Q5VY43 1037 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 LPCAT2Q7L5N7 544 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 RAB44Q7Z6P3 723 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 IL17RCQ8NAC3 791 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 TXNDC5Q8NBS9 432 aaKnown RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 OR2I1PQ8NGU4 316 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 LEO1Q8WVC0 666 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 PKMYT1Q99640 499 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 DPP3Q9NY33 737 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 LARSQ9P2J5 1176 aaKnown RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 UXTQ9UBK9 157 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 PILRBQ9UKJ0 227 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 CIZ1Q9ULV3 898 aaPredicted RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 NOL7Q9UMY1 257 aaKnown RBP17.24■□□□□ 0.35
SSBP4-211ENST00000601614 C2CD2Q9Y426 696 aa17.24■□□□□ 0.35
SSBP4-211ENST00000601614 KPNA7A9QM74 516 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 HCRTO43612 131 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 TCF3P15923 654 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 ACAT1P24752 427 aaKnown RBP17.23■□□□□ 0.35
SSBP4-211ENST00000601614 WNT7BP56706 349 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 SCAPQ12770 1279 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 NR1H3Q13133 447 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 PDZD3Q86UT5 571 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 C12orf40Q86WS4 652 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 CCDC83Q8IWF9 413 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 FIZ1Q96SL8 496 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 REEP2Q9BRK0 252 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 IKZF4Q9H2S9 585 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 ASB7Q9H672 318 aa17.23■□□□□ 0.35
SSBP4-211ENST00000601614 H0YCG3 227 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 K7ENM7 598 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 ADAM23O75077 832 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 ZIC2O95409 532 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 KLF8O95600 359 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 NFATC1O95644 943 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 CYP17A1P05093 508 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 CFIP05156 583 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 TIE1P35590 1138 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 PRPHP41219 470 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 SLC6A11P48066 632 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 NEK4P51957 841 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 MRPS21P82921 87 aaKnown RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 TSPY1Q01534 308 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 GNL2Q13823 731 aaKnown RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 NFE2Q16621 373 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 COL28A1Q2UY09 1125 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 LYSMD4Q5XG99 296 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 DTHD1Q6ZMT9 781 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 OSTM1Q86WC4 334 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 PDCL2Q8N4E4 241 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 CCDC26Q8TAB7 109 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 WHAMMQ8TF30 809 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 BBC3Q96PG8 261 aaPredicted RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 GTPBP2Q9BX10 602 aaKnown RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.22■□□□□ 0.35
SSBP4-211ENST00000601614 KCND2Q9NZV8 630 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 GTF3C4Q9UKN8 822 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 L1RE1Q9UN81 338 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 ARHGAP26Q9UNA1 814 aa17.22■□□□□ 0.35
SSBP4-211ENST00000601614 SCAMP3O14828 347 aaKnown RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 MAP3K13O43283 966 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 CD59P13987 128 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 HDCP19113 662 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 KIR2DL1P43626 348 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 RPL10AP62906 217 aaKnown RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 TMEM119Q4V9L6 283 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 INTS6LQ5JSJ4 861 aaKnown RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 CRELD2Q6UXH1 353 aaPredicted RBP17.21■□□□□ 0.35
SSBP4-211ENST00000601614 DEFB119Q8N690 84 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 HMGB4Q8WW32 186 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 FAM84AQ96KN4 292 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 SPACA7Q96KW9 195 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 CAMK1GQ96NX5 476 aa17.21■□□□□ 0.35
SSBP4-211ENST00000601614 CAPN10Q9HC96 672 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms