RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 CXCL12P48061 93 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 CCR3P51677 355 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 MYL6P60660 151 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 CYP27A1Q02318 531 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 RUNX3Q13761 415 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 ITPRIPL2Q3MIP1 535 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 WDR72Q3MJ13 1102 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 KMT5BQ4FZB7 885 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 C1orf228Q6PIY5 440 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 C4orf50Q6ZRC1 276 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 C12orf56Q8IXR9 622 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 SPEM1Q8N4L4 309 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 KIAA0895Q8NCT3 520 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 OR6B3Q8NGW1 331 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 ELMO3Q96BJ8 720 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 PCED1BQ96HM7 432 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 TRPC7Q9HCX4 862 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 UXTQ9UBK9 157 aaPredicted RBP12.49□□□□□ -0.41
SYMPK-216ENST00000601582 ATG2BQ96BY7 2078 aa12.49□□□□□ -0.41
SYMPK-216ENST00000601582 C2orf78A6NCI8 922 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 SOBPA7XYQ1 873 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 TACC1O75410 805 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 ARSAP15289 507 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 CMA1P23946 247 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 ID4P47928 161 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 USP46P62068 366 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 DMWDQ09019 674 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 TRPC3Q13507 836 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 CCINQ13939 588 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 LRRC32Q14392 662 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 MDH1BQ5I0G3 518 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 DGKKQ5KSL6 1271 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 ARL14EPQ8N8R7 260 aaPredicted RBP12.48□□□□□ -0.41
SYMPK-216ENST00000601582 TTC16Q8NEE8 873 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 MYCBPAPQ8TBZ2 947 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 IER2Q9BTL4 223 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 FAM126AQ9BYI3 521 aaPredicted RBP12.48□□□□□ -0.41
SYMPK-216ENST00000601582 XYLT2Q9H1B5 865 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 EPC1Q9H2F5 836 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 SNX25Q9H3E2 840 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 DPEP3Q9H4B8 488 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 DMAC2Q9NW81 257 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 GCNT4Q9P109 453 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 CGNQ9P2M7 1197 aaKnown RBP12.48□□□□□ -0.41
SYMPK-216ENST00000601582 NXF1Q9UBU9 619 aaKnown RBP12.48□□□□□ -0.41
SYMPK-216ENST00000601582 HPSEQ9Y251 543 aa12.48□□□□□ -0.41
SYMPK-216ENST00000601582 LRRIQ3A6PVS8 624 aaPredicted RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 CHURC1-FNTBB4DL54 471 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 K7ESF4 209 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 PHACTR2O75167 634 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 FAM163BP0C2L3 166 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 PTPN1P18031 435 aaKnown RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 FNTBP49356 437 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 CACNA2D1P54289 1103 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 NRLP54845 237 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 CDH8P55286 799 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 TNNC1P63316 161 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 FAM160A1Q05DH4 1040 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 ZNF268Q14587 947 aaPredicted RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 MAPRE1Q15691 268 aaKnown RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 TDRD10Q5VZ19 366 aaKnown RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 NAIF1Q69YI7 327 aaPredicted RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 CC2D1AQ6P1N0 951 aaPredicted RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 PKN3Q6P5Z2 889 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 VSTM1Q6UX27 236 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 PARD3BQ8TEW8 1205 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 RMDN1Q96DB5 314 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 SPATA17Q96L03 361 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 SPATA32Q96LK8 384 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 KCTD10Q9H3F6 313 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 KIF9Q9HAQ2 790 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 FBRSL1Q9HCM7 1045 aaKnown RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 EXOC1Q9NV70 894 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 TMEM30AQ9NV96 361 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 NCDNQ9UBB6 729 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 SMG5Q9UPR3 1016 aaKnown RBP12.47□□□□□ -0.41
SYMPK-216ENST00000601582 GTF3C3Q9Y5Q9 886 aa12.47□□□□□ -0.41
SYMPK-216ENST00000601582 DMXL1Q9Y485 3027 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 TRAV19A0A0A6YYK7 116 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 A8MXQ7 604 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 F8VP50 259 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 CLDN5O00501 218 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 HRO43593 1189 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 VNN1O95497 513 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 STAU1O95793 577 aaKnown RBP12.46□□□□□ -0.41
SYMPK-216ENST00000601582 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
SYMPK-216ENST00000601582 CKMP06732 381 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 USP17L7P0C7H9 530 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 PRR29P0C7W0 189 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 HDCP19113 662 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 ATICP31939 592 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 GALK1P51570 392 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 DLG4P78352 724 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 CLDN10P78369 228 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 ZXDBP98169 803 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 PSMD2Q13200 908 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 SRSF5Q13243 272 aaKnown RBP12.46□□□□□ -0.41
SYMPK-216ENST00000601582 BIRC3Q13489 604 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 PPP2R5DQ14738 602 aa12.46□□□□□ -0.41
SYMPK-216ENST00000601582 MTF1Q14872 753 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms