RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 MRPL9Q9BYD2 267 aaKnown RBP18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 TTC7AQ9ULT0 858 aaPredicted RBP18.62■□□□□ 0.57
SHKBP1-224ENST00000600718 E5RJQ4 531 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 TRAPPC3O43617 180 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 TIMP1P01033 207 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 ITGB1P05556 798 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 ACADSBP45954 432 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 RPL34P49207 117 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 PLCB3Q01970 1234 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 PIGHQ14442 188 aaPredicted RBP18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 CLUL1Q15846 466 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 MDH1BQ5I0G3 518 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 TEX35Q5T0J7 233 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 SPATA4Q8NEY3 305 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 HSFY1Q96LI6 401 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 DUSP16Q9BY84 665 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 NRDE2Q9H7Z3 1164 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 CRTAC1Q9NQ79 661 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 DNAJB4Q9UDY4 337 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 TULP2O00295 520 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 KIAA0355O15063 1070 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 ALDH2P05091 517 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 TKTP29401 623 aaKnown RBP18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 RGS7P49802 495 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 OR6B2Q6IFH4 312 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 ZDHHC17Q8IUH5 632 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 MYCBPAPQ8TBZ2 947 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 FNIP1Q8TF40 1166 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 ALG3Q92685 438 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 KRT35Q92764 455 aa18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.61■□□□□ 0.577e-6■■■■□ 21.2
SHKBP1-224ENST00000600718 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.61■□□□□ 0.57
SHKBP1-224ENST00000600718 XPO1O14980 1071 aaKnown RBP18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 TADA2AO75478 443 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 RFC1P35251 1148 aaPredicted RBP18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 RWDD2BP57060 319 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 OVOS1Q6IE37 1185 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 PAQR9Q6ZVX9 377 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 CPNE8Q86YQ8 564 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 NIPA2Q8N8Q9 360 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 RTP3Q9BQQ7 232 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 MED10Q9BTT4 135 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 COLEC11Q9BWP8 271 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 B3GNT5Q9BYG0 378 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 EHD2Q9NZN4 543 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 SCN5AQ14524 2016 aa18.6■□□□□ 0.57
SHKBP1-224ENST00000600718 ABHD14A-ACY1A0A1B0GW23 586 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 F8W810 466 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 PGRMC1O00264 195 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 PLA2G4AP47712 749 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 GATMP50440 423 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 ELF2Q15723 593 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 FAM102AQ5T9C2 384 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 DCAF12L1Q5VU92 463 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 FAM183BPQ6ZVS7 135 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 GPR161Q8N6U8 529 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 VWCEQ96DN2 955 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 TMEM175Q9BSA9 504 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 METTL5Q9NRN9 209 aaKnown RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 SMARCAL1Q9NZC9 954 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 MYBPHLA2RUH7 354 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 TRIM43BA6NCK2 446 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 TBKBP1A7MCY6 615 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 CLDN5O00501 218 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 NRP1O14786 923 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 NPR3P17342 541 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 OGDHQ02218 1023 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 FAM171BQ6P995 826 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 RHOT1Q8IXI2 618 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 MMGT1Q8N4V1 131 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 JOSD2Q8TAC2 188 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 TRIM43Q96BQ3 446 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 NAP1L3Q99457 506 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 OGFRQ9NZT2 677 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 FAN1Q9Y2M0 1017 aa18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 PRG3Q9Y2Y8 225 aaPredicted RBP18.59■□□□□ 0.57
SHKBP1-224ENST00000600718 PSTPIP1O43586 416 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 GABBR2O75899 941 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 FAM200BP0CF97 657 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 SCNN1AP37088 669 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 MARCKSL1P49006 195 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 RNASE9P60153 205 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 SLC6A3Q01959 620 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 YWHAHQ04917 246 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 ZNF252P-AS1Q0IIN9 211 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 ACAP1Q15027 740 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 MAPRE1Q15691 268 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 INTS6LQ5JSJ4 861 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 CC2D1AQ6P1N0 951 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 NOA1Q8NC60 698 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 PCED1BQ96HM7 432 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 RNPC3Q96LT9 517 aaKnown RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 PLVAPQ9BX97 442 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 PRDM5Q9NQX1 630 aaPredicted RBP18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 USTQ9Y2C2 406 aa18.58■□□□□ 0.56
SHKBP1-224ENST00000600718 PIK3R2O00459 728 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 RAG1P15918 1043 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 PSMA2P25787 234 aa18.57■□□□□ 0.56
SHKBP1-224ENST00000600718 C2orf54Q08AI8 447 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 151.7 ms