RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 MYL4P12829 197 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 HMGA1P17096 107 aaKnown RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 PTPN1P18031 435 aaKnown RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 CYP2F1P24903 491 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CDH8P55286 799 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CBWD6Q4V339 395 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 DCAF17Q5H9S7 520 aaPredicted RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 CBWD3Q5JTY5 395 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CBWD5Q5RIA9 395 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 TCERG1LQ5VWI1 586 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 SPOPLQ6IQ16 392 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 POTEHQ6S545 545 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 RBM43Q6ZSC3 357 aaKnown RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 SHKBP1Q8TBC3 707 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 GPT2Q8TD30 523 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 ING5Q8WYH8 240 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 FGF14Q92915 247 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 TRMT2BQ96GJ1 504 aaKnown RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 TNIP3Q96KP6 325 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 SPATA17Q96L03 361 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 MYRFLQ96LU7 910 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 LPIN3Q9BQK8 851 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 TRPV4Q9HBA0 871 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 IL21Q9HBE4 155 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 ZNF334Q9HCZ1 680 aaPredicted RBP17.24■□□□□ 0.35
LSM4-206ENST00000600289 RAB20Q9NX57 234 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 ZMYM5Q9UJ78 669 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 NUMBLQ9Y6R0 609 aa17.24■□□□□ 0.35
LSM4-206ENST00000600289 CHD8Q9HCK8 2581 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 SOBPA7XYQ1 873 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 NRG2O14511 850 aaPredicted RBP17.23■□□□□ 0.35
LSM4-206ENST00000600289 ECI2O75521 394 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 FGFR1OPO95684 399 aaKnown RBP17.23■□□□□ 0.35
LSM4-206ENST00000600289 WEE1P30291 646 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 CDC25CP30307 473 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 RAP1GAPP47736 663 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 CCDC40Q4G0X9 1142 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 MDH1BQ5I0G3 518 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 CWF19L1Q69YN2 538 aaKnown RBP17.23■□□□□ 0.35
LSM4-206ENST00000600289 PARM1Q6UWI2 310 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 SCARA5Q6ZMJ2 495 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 TRIM59Q8IWR1 403 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 CRYBG2Q8N1P7 616 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 SLC44A3Q8N4M1 653 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 TTC39CQ8N584 583 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 FAM200AQ8TCP9 573 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 SEMA4DQ92854 862 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 ELOVL4Q9GZR5 314 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 DPEP3Q9H4B8 488 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 MMRN2Q9H8L6 949 aa17.23■□□□□ 0.35
LSM4-206ENST00000600289 MYO16Q9Y6X6 1858 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 A0A1W2PRU2 124 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 TRIM66O15016 1216 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 P4HA2O15460 535 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 MBD3O95983 291 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 SRFP11831 508 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 FCARP24071 287 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 FMO5P49326 533 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 CLCN5P51795 746 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 STX17P56962 302 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 TEAD2Q15562 447 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 CT47A1Q5JQC4 288 aaPredicted RBP17.22■□□□□ 0.35
LSM4-206ENST00000600289 GAREM2Q75VX8 874 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 ELSPBP1Q96BH3 223 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 ELMO3Q96BJ8 720 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 MCRS1Q96EZ8 462 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 C8orf48Q96LL4 319 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 MED15Q96RN5 788 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 SLC2A4RGQ9NR83 387 aa17.22■□□□□ 0.35
LSM4-206ENST00000600289 UXTQ9UBK9 157 aaPredicted RBP17.22■□□□□ 0.35
LSM4-206ENST00000600289 ATP8B3O60423 1300 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 ATRXP46100 2492 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 LRRN2O75325 713 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 CLSTN1O94985 981 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 BDNFP23560 247 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 GABRR2P28476 465 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 GPR15P49685 360 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 NDST1P52848 882 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 NLRP12P59046 1061 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 CYP27A1Q02318 531 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 DDR2Q16832 855 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 GIPC2Q8TF65 315 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 SMARCD2Q92925 531 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 GCNAQ96QF7 691 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 SRRTQ9BXP5 876 aaKnown RBP17.21■□□□□ 0.35
LSM4-206ENST00000600289 B3GNT5Q9BYG0 378 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 EHD2Q9NZN4 543 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 DACH1Q9UI36 760 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 TICRRQ7Z2Z1 1910 aa17.21■□□□□ 0.35
LSM4-206ENST00000600289 SLC38A8A6NNN8 435 aa17.2■□□□□ 0.34
LSM4-206ENST00000600289 CILPO75339 1184 aa17.2■□□□□ 0.34
LSM4-206ENST00000600289 F11P03951 625 aa17.2■□□□□ 0.34
LSM4-206ENST00000600289 CCDC192P0DO97 292 aa17.2■□□□□ 0.34
LSM4-206ENST00000600289 GJA1P17302 382 aa17.2■□□□□ 0.34
LSM4-206ENST00000600289 TRIM21P19474 475 aaKnown RBP17.2■□□□□ 0.34
LSM4-206ENST00000600289 DDX6P26196 483 aaKnown RBP eCLIP17.2■□□□□ 0.34
LSM4-206ENST00000600289 ERCC5P28715 1186 aaPredicted RBP17.2■□□□□ 0.34
LSM4-206ENST00000600289 ANGPT1Q15389 498 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms