RNA–Protein interactions for RNA: ENST00000600097.1

SMG9-210, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 538 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-210ENST00000600097 TTC16Q8NEE8 873 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 ZSWIM2Q8NEG5 633 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 CEP295NLQ96MC4 621 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 SLC22A12Q96S37 553 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 DUSP15Q9H1R2 295 aaPredicted RBP18.42■□□□□ 0.54
SMG9-210ENST00000600097 GCNT4Q9P109 453 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 FBXO2Q9UK22 296 aaPredicted RBP18.42■□□□□ 0.54
SMG9-210ENST00000600097 CLIC4Q9Y696 253 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 WNT6Q9Y6F9 365 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 DENND4CQ5VZ89 1909 aa18.42■□□□□ 0.54
SMG9-210ENST00000600097 VPS37CA5D8V6 355 aaPredicted RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 KIAA0391O15091 583 aaKnown RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 IDEP14735 1019 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 PFKLP17858 780 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 HDCP19113 662 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 PDCP20941 246 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 SHC2P98077 582 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 PSMD2Q13200 908 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 MAPRE1Q15691 268 aaKnown RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 SOWAHAQ2M3V2 549 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 NAIF1Q69YI7 327 aaPredicted RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 FAM171BQ6P995 826 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 VSTM1Q6UX27 236 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 CCDC73Q6ZRK6 1079 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 C11orf74Q86VG3 221 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 OSTM1Q86WC4 334 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 ARL14EPQ8N8R7 260 aaPredicted RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 SH3RF2Q8TEC5 729 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 ANKRD36BP1Q96IX9 119 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 CBWD1Q9BRT8 395 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 LSM14BQ9BX40 385 aaKnown RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 MTMR12Q9C0I1 747 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 PDE11AQ9HCR9 933 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 POLR3BQ9NW08 1133 aaPredicted RBP18.41■□□□□ 0.54
SMG9-210ENST00000600097 SIX4Q9UIU6 781 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 ARHGAP26Q9UNA1 814 aa18.41■□□□□ 0.54
SMG9-210ENST00000600097 GOLGA8IPA6NC78 632 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 GOLGA8JA6NMD2 632 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 NFATC1O95644 943 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 CASP5P51878 434 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 RNF43Q68DV7 783 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 GPD1LQ8N335 351 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 NOC3LQ8WTT2 800 aaKnown RBP18.4■□□□□ 0.54
SMG9-210ENST00000600097 EZH1Q92800 747 aaPredicted RBP18.4■□□□□ 0.54
SMG9-210ENST00000600097 SPATA17Q96L03 361 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 EHD2Q9NZN4 543 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 MAGEC2Q9UBF1 373 aaPredicted RBP18.4■□□□□ 0.54
SMG9-210ENST00000600097 CDH9Q9ULB4 789 aa18.4■□□□□ 0.54
SMG9-210ENST00000600097 ZNF638Q14966 1978 aaKnown RBP18.4■□□□□ 0.54
SMG9-210ENST00000600097 FRMD3A2A2Y4 597 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 C2orf78A6NCI8 922 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 DGKEP52429 567 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 CREB5Q02930 508 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 SURF1Q15526 300 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 CCDC142Q17RM4 750 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 STXBP4Q6ZWJ1 553 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 LIMS2Q7Z4I7 341 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 TSTD1Q8NFU3 115 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 HPDLQ96IR7 371 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 CLIC6Q96NY7 704 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 SYT15Q9BQS2 421 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 SMOC1Q9H4F8 434 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 PCIF1Q9H4Z3 704 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 PANK4Q9NVE7 773 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 INTS13Q9NVM9 706 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 OBSL1O75147 1896 aa18.39■□□□□ 0.53
SMG9-210ENST00000600097 ATG2BQ96BY7 2078 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 BCLAF3A2AJT9 711 aaKnown RBP18.38■□□□□ 0.53
SMG9-210ENST00000600097 HCRTO43612 131 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 KCNK5O95279 499 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 CAVIN2O95810 425 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 TNNC2P02585 160 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 GBP1P32455 592 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 STAT6P42226 847 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 USP39Q53GS9 565 aaKnown RBP18.38■□□□□ 0.53
SMG9-210ENST00000600097 SCARA3Q6AZY7 606 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 DENND5BQ6ZUT9 1274 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 KIAA1958Q8N8K9 716 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 KBTBD7Q8WVZ9 684 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 FAM84AQ96KN4 292 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 EDEM2Q9BV94 578 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 LINC00597Q9H2U6 94 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 TRPM5Q9NZQ8 1165 aa18.38■□□□□ 0.53
SMG9-210ENST00000600097 ZNF233A6NK53 670 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 DCLK1O15075 740 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 ATP2C2O75185 946 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 PRPF6O94906 941 aaKnown RBP18.37■□□□□ 0.53
SMG9-210ENST00000600097 BDNFP23560 247 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 ANXA13P27216 316 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 GRIK1P39086 918 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 PPP3CCP48454 512 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 DUOXA2Q1HG44 320 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 TCEAL6Q6IPX3 200 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 CCDC65Q8IXS2 484 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 USP33Q8TEY7 942 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 TCEAL3Q969E4 200 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 MYLPFQ96A32 169 aa18.37■□□□□ 0.53
SMG9-210ENST00000600097 MORC2Q9Y6X9 1032 aaPredicted RBP18.37■□□□□ 0.53
SMG9-210ENST00000600097 TRIM66O15016 1216 aa18.36■□□□□ 0.53
SMG9-210ENST00000600097 WARSP23381 471 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms