RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 SLC44A3Q8N4M1 653 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 EHBP1Q8NDI1 1231 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 SLC2A14Q8TDB8 520 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 EDAQ92838 391 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 KAT5Q92993 513 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 FAXDC2Q96IV6 333 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 KCNK16Q96T55 309 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 KXD1Q9BQD3 176 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 C11orf16Q9NQ32 467 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 ANO10Q9NW15 660 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 DOCK8Q8NF50 2099 aa16.17■□□□□ 0.18
LIG1-219ENST00000600055 TRIM66O15016 1216 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 FGF19O95750 216 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 ANXA13P27216 316 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 ADORA2BP29275 332 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 RAD23BP54727 409 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 USP46P62068 366 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 CETN1Q12798 172 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 TANGO2Q6ICL3 276 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 UBR7Q8N806 425 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 SLC4A11Q8NBS3 891 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 ENOX1Q8TC92 643 aaKnown RBP16.16■□□□□ 0.18
LIG1-219ENST00000600055 SPATA17Q96L03 361 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 C8orf48Q96LL4 319 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 NT5C1BQ96P26 610 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 CRACR2AQ9BSW2 395 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 PLA2G2FQ9BZM2 168 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 INTS2Q9H0H0 1204 aaKnown RBP16.16■□□□□ 0.18
LIG1-219ENST00000600055 SLITRK6Q9H5Y7 841 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 KRT82Q9NSB4 513 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 NFE2L3Q9Y4A8 694 aa16.16■□□□□ 0.18
LIG1-219ENST00000600055 TADA3O75528 432 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 AP1G2O75843 785 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 BEST1O76090 585 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 FCARP24071 287 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 CDC25CP30307 473 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 TYRO3Q06418 890 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 GPR158Q5T848 1215 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 DENND5BQ6ZUT9 1274 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 MTSS1LQ765P7 747 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 RRAGAQ7L523 313 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 FAM114A1Q8IWE2 563 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 PPM1KQ8N3J5 372 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 ZMIZ2Q8NF64 920 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 ZSCAN18Q8TBC5 510 aaPredicted RBP16.15■□□□□ 0.18
LIG1-219ENST00000600055 NXPE3Q969Y0 559 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 CYFIP2Q96F07 1278 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 SMARCD1Q96GM5 515 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 TMEM176AQ96HP8 235 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 MYRFLQ96LU7 910 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 HEXIM2Q96MH2 286 aaKnown RBP16.15■□□□□ 0.18
LIG1-219ENST00000600055 ASB16Q96NS5 453 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 SMOQ99835 787 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 ATP8B3O60423 1300 aa16.15■□□□□ 0.18
LIG1-219ENST00000600055 KCNJ18B7U540 433 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 PRKCSHP14314 528 aaPredicted RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 SLC9A1P19634 815 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 ACO1P21399 889 aaKnown RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 TBXAS1P24557 533 aaPredicted RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 VIPR2P41587 438 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 APBA1Q02410 837 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 IFRD2Q12894 506 aaPredicted RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 KCNJ12Q14500 433 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 MAN2A1Q16706 1144 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 KLHL40Q2TBA0 621 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 ARHGAP15Q53QZ3 475 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 PPP1R26Q5T8A7 1209 aaPredicted RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 PHLDB3Q6NSJ2 640 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 TRIM67Q6ZTA4 783 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 UBALD2Q8IYN6 164 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 TTC39CQ8N584 583 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 SMARCD2Q92925 531 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 TRMT2BQ96GJ1 504 aaKnown RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 GCNAQ96QF7 691 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 HNRNPABQ99729 332 aaKnown RBP16.14■□□□□ 0.17
LIG1-219ENST00000600055 TUBGCP2Q9BSJ2 902 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 SLC46A2Q9BY10 475 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 GCNT4Q9P109 453 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 DUSP12Q9UNI6 340 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 NCANO14594 1321 aa16.14■□□□□ 0.17
LIG1-219ENST00000600055 BDP1A6H8Y1 2624 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 ECI2O75521 394 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 MAP3K7CLP57077 242 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 SIGLEC14Q08ET2 396 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 VWA3BQ502W6 1294 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 MIIPQ5JXC2 388 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 TXNDC8Q6A555 127 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 GJB7Q6PEY0 223 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 MAB21L3Q8N8X9 362 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 SCAMP5Q8TAC9 235 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 RSPRY1Q96DX4 576 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 KREMEN1Q96MU8 473 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 GPR88Q9GZN0 384 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 SMG9Q9H0W8 520 aaKnown RBP16.13■□□□□ 0.17
LIG1-219ENST00000600055 TASP1Q9H6P5 420 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 ZFP14Q9HCL3 533 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 DMAP1Q9NPF5 467 aaPredicted RBP16.13■□□□□ 0.17
LIG1-219ENST00000600055 FANCLQ9NW38 375 aa16.13■□□□□ 0.17
LIG1-219ENST00000600055 UXTQ9UBK9 157 aaPredicted RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms