RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 EDRF1Q3B7T1 1238 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 ARHGAP29Q52LW3 1261 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 MON1AQ86VX9 555 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 TAF4BQ92750 862 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 MSANTD3Q96H12 275 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 TNIP3Q96KP6 325 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 SPATA17Q96L03 361 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 MYRFLQ96LU7 910 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 CEP295NLQ96MC4 621 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 PHOX2BQ99453 314 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 SLC46A2Q9BY10 475 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 SMG9Q9H0W8 520 aaKnown RBP15.59■□□□□ 0.09
XRCC1-208ENST00000598422 DPEP3Q9H4B8 488 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 MMRN2Q9H8L6 949 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
XRCC1-208ENST00000598422 SPATA6Q9NWH7 488 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-208ENST00000598422 CIZ1Q9ULV3 898 aaPredicted RBP15.59■□□□□ 0.09
XRCC1-208ENST00000598422 NOTCH4Q99466 2003 aa15.58■□□□□ 0.09
XRCC1-208ENST00000598422 TRAV19A0A0A6YYK7 116 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 F8VP50 259 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 CETN3O15182 167 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 HLA-DRAP01903 254 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 CKMP06732 381 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 GCLMP48507 274 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 CDH8P55286 799 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 ZCWPW2Q504Y3 356 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 ZNF658Q5TYW1 1059 aaPredicted RBP15.58■□□□□ 0.08
XRCC1-208ENST00000598422 TXNDC8Q6A555 127 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 CC2D1AQ6P1N0 951 aaPredicted RBP15.58■□□□□ 0.08
XRCC1-208ENST00000598422 C1orf228Q6PIY5 440 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 DENND5BQ6ZUT9 1274 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 TMEM150AQ86TG1 271 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 C1orf210Q8IVY1 113 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 TTC16Q8NEE8 873 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 ENGASEQ8NFI3 743 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 FAM3CQ92520 227 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 TIGD1Q96MW7 591 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 MED10Q9BTT4 135 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 DLGAP2Q9P1A6 1054 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 MTF2Q9Y483 593 aaPredicted RBP15.58■□□□□ 0.08
XRCC1-208ENST00000598422 NME7Q9Y5B8 376 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 DOCK6Q96HP0 2047 aa15.58■□□□□ 0.08
XRCC1-208ENST00000598422 SOBPA7XYQ1 873 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 TADA3O75528 432 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 GLULP15104 373 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 PDE6CP51160 858 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 ENPEPQ07075 957 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 STIM1Q13586 685 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 ELMO3Q96BJ8 720 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 EEF2KMTQ96G04 330 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 ZFYVE19Q96K21 471 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 C8orf48Q96LL4 319 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 ZNF518BQ9C0D4 1074 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 C8orf33Q9H7E9 229 aaPredicted RBP15.57■□□□□ 0.08
XRCC1-208ENST00000598422 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.57■□□□□ 0.082e-7■■■■■ 93.2
XRCC1-208ENST00000598422 TDP1Q9NUW8 608 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 PCDHA5Q9Y5H7 936 aa15.57■□□□□ 0.08
XRCC1-208ENST00000598422 ARNTLO00327 626 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 CLDN5O00501 218 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 LAMTOR5O43504 91 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 STX10O60499 249 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 GFRA3O60609 400 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 ASS1P00966 412 aaKnown RBP15.56■□□□□ 0.08
XRCC1-208ENST00000598422 USP17L7P0C7H9 530 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 GTF2H1P32780 548 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 PRCPP42785 496 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 NOP14P78316 857 aaKnown RBP15.56■□□□□ 0.08
XRCC1-208ENST00000598422 C1orf220Q5T0J3 134 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 SPOPLQ6IQ16 392 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 FRMD5Q7Z6J6 570 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 ERCC4Q92889 916 aaPredicted RBP15.56■□□□□ 0.08
XRCC1-208ENST00000598422 USP13Q92995 863 aaPredicted RBP15.56■□□□□ 0.08
XRCC1-208ENST00000598422 LRRC3BQ96PB8 259 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 DNAI2Q9GZS0 605 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 SDCBP2Q9H190 292 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 TMEM8AQ9HCN3 771 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 TRPM5Q9NZQ8 1165 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 CACNA1HO95180 2353 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 PIEZO1Q92508 2521 aa15.56■□□□□ 0.08
XRCC1-208ENST00000598422 PSMA7O14818 248 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 CCNE1P24864 410 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 NBL1P41271 181 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 ASPAP45381 313 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 RPS9P46781 194 aaKnown RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 SOX9P48436 509 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 MXI1P50539 228 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 MLLT6P55198 1093 aaPredicted RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 FKBP3Q00688 224 aaKnown RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 PPP3CAQ08209 521 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 IFRD2Q12894 506 aaPredicted RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 ZNF268Q14587 947 aaPredicted RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 COBLL1Q53SF7 1204 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 DCAF17Q5H9S7 520 aaPredicted RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 TCERG1LQ5VWI1 586 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 ZC3H14Q6PJT7 736 aaKnown RBP15.55■□□□□ 0.08
XRCC1-208ENST00000598422 ACOT1Q86TX2 421 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 FAM35AQ86V20 835 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 TTC8Q8TAM2 541 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 TAS1R2Q8TE23 839 aa15.55■□□□□ 0.08
XRCC1-208ENST00000598422 SMARCD1Q96GM5 515 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms