RNA–Protein interactions for RNA: ENST00000597965.2

PNKP-210, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 351 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-210ENST00000597965 HDCP19113 662 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 KCNA4P22459 653 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 ANXA13P27216 316 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 ST3GAL2Q16842 350 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 DUOXA2Q1HG44 320 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 SDHAF4Q5VUM1 108 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 PKN3Q6P5Z2 889 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 FAM171BQ6P995 826 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 USP49Q70CQ1 688 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 SCN4BQ8IWT1 228 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 TTC16Q8NEE8 873 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 RPLP0P6Q8NHW5 317 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 NOC3LQ8WTT2 800 aaKnown RBP18.21■□□□□ 0.51
PNKP-210ENST00000597965 MTMR12Q9C0I1 747 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 PDE11AQ9HCR9 933 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 ARHGAP26Q9UNA1 814 aa18.21■□□□□ 0.51
PNKP-210ENST00000597965 SDK1Q7Z5N4 2213 aa18.21■□□□□ 0.5
PNKP-210ENST00000597965 ATG2BQ96BY7 2078 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 TRIM66O15016 1216 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 TADA3O75528 432 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 USP4Q13107 963 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 PSMD2Q13200 908 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 DMC1Q14565 340 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 SF3A2Q15428 464 aaKnown RBP18.2■□□□□ 0.5
PNKP-210ENST00000597965 SOWAHAQ2M3V2 549 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 EML3Q32P44 896 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 PLK5Q496M5 336 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 USP39Q53GS9 565 aaKnown RBP18.2■□□□□ 0.5
PNKP-210ENST00000597965 STPG1Q5TH74 334 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 CHFRQ96EP1 664 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 HPDLQ96IR7 371 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 HHIPQ96QV1 700 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 BACH2Q9BYV9 841 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 IKZF4Q9H2S9 585 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 INTS13Q9NVM9 706 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 TRPM5Q9NZQ8 1165 aa18.2■□□□□ 0.5
PNKP-210ENST00000597965 CNOT1A5YKK6 2376 aaKnown RBP18.2■□□□□ 0.5
PNKP-210ENST00000597965 GOLGA8IPA6NC78 632 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 GOLGA8JA6NMD2 632 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 SLC9A3R1O14745 358 aaPredicted RBP18.19■□□□□ 0.5
PNKP-210ENST00000597965 GRIK1P39086 918 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 DENND5BQ6ZUT9 1274 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 ARL14EPQ8N8R7 260 aaPredicted RBP18.19■□□□□ 0.5
PNKP-210ENST00000597965 CXorf38Q8TB03 319 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 SH3RF2Q8TEC5 729 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 CYP2S1Q96SQ9 504 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 SYT15Q9BQS2 421 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 CBWD1Q9BRT8 395 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 FBRSL1Q9HCM7 1045 aaKnown RBP18.19■□□□□ 0.5
PNKP-210ENST00000597965 GCNT4Q9P109 453 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 WNT6Q9Y6F9 365 aa18.19■□□□□ 0.5
PNKP-210ENST00000597965 TM4SF5O14894 197 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 FAM163BP0C2L3 166 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 CASP5P51878 434 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 WNT7BP56706 349 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 AMPD3Q01432 767 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 CUL4AQ13619 759 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 RNF43Q68DV7 783 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 WDR49Q8IV35 697 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 STKLD1Q8NE28 680 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 TSTD1Q8NFU3 115 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 CLIC6Q96NY7 704 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 TNMDQ9H2S6 317 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 CUEDC2Q9H467 287 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 PCIF1Q9H4Z3 704 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 SIX4Q9UIU6 781 aa18.18■□□□□ 0.5
PNKP-210ENST00000597965 KMT2BQ9UMN6 2715 aaPredicted RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 PRPF6O94906 941 aaKnown RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 CAVIN2O95810 425 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 WARSP23381 471 aaKnown RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 GBP1P32455 592 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 DGKEP52429 567 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 SHC2P98077 582 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 CYP27A1Q02318 531 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 CREB5Q02930 508 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 SLC39A14Q15043 492 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 CCDC6Q16204 474 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 LIMS2Q7Z4I7 341 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 OSTM1Q86WC4 334 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 RIN3Q8TB24 985 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 SLC22A12Q96S37 553 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 MMS19Q96T76 1030 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 LSM14BQ9BX40 385 aaKnown RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 DUSP15Q9H1R2 295 aaPredicted RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 ZSCAN16Q9H4T2 348 aaPredicted RBP18.17■□□□□ 0.5
PNKP-210ENST00000597965 ANAPC1Q9H1A4 1944 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 EML5Q05BV3 1969 aa18.17■□□□□ 0.5
PNKP-210ENST00000597965 C2orf78A6NCI8 922 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 KRT37O76014 449 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 ALDH1A2O94788 518 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 SNRPFP62306 86 aaKnown RBP18.16■□□□□ 0.5
PNKP-210ENST00000597965 NOP14P78316 857 aaKnown RBP18.16■□□□□ 0.5
PNKP-210ENST00000597965 CEBPZQ03701 1054 aaKnown RBP18.16■□□□□ 0.5
PNKP-210ENST00000597965 HSF5Q4G112 596 aaPredicted RBP18.16■□□□□ 0.5
PNKP-210ENST00000597965 DAB2IPQ5VWQ8 1189 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 DDX42Q86XP3 938 aaKnown RBP eCLIP18.16■□□□□ 0.5
PNKP-210ENST00000597965 ZSWIM2Q8NEG5 633 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 MYCBPAPQ8TBZ2 947 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 MYLPFQ96A32 169 aa18.16■□□□□ 0.5
PNKP-210ENST00000597965 SLITRK1Q96PX8 696 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms